KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100388628
Entry
100388628         CDS       T03264                                 

Gene name
PDGFB
Definition
(RefSeq) platelet derived growth factor subunit B
  KO
K17386  platelet-derived growth factor subunit B
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc01521  EGFR tyrosine kinase inhibitor resistance
cjc04010  MAPK signaling pathway
cjc04014  Ras signaling pathway
cjc04015  Rap1 signaling pathway
cjc04020  Calcium signaling pathway
cjc04072  Phospholipase D signaling pathway
cjc04151  PI3K-Akt signaling pathway
cjc04510  Focal adhesion
cjc04540  Gap junction
cjc04630  JAK-STAT signaling pathway
cjc04810  Regulation of actin cytoskeleton
cjc05167  Kaposi sarcoma-associated herpesvirus infection
cjc05200  Pathways in cancer
cjc05206  MicroRNAs in cancer
cjc05211  Renal cell carcinoma
cjc05214  Glioma
cjc05215  Prostate cancer
cjc05218  Melanoma
cjc05231  Choline metabolism in cancer
cjc05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    100388628 (PDGFB)
   04014 Ras signaling pathway
    100388628 (PDGFB)
   04015 Rap1 signaling pathway
    100388628 (PDGFB)
   04630 JAK-STAT signaling pathway
    100388628 (PDGFB)
   04020 Calcium signaling pathway
    100388628 (PDGFB)
   04072 Phospholipase D signaling pathway
    100388628 (PDGFB)
   04151 PI3K-Akt signaling pathway
    100388628 (PDGFB)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100388628 (PDGFB)
   04540 Gap junction
    100388628 (PDGFB)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    100388628 (PDGFB)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100388628 (PDGFB)
   05206 MicroRNAs in cancer
    100388628 (PDGFB)
   05231 Choline metabolism in cancer
    100388628 (PDGFB)
  09162 Cancer: specific types
   05214 Glioma
    100388628 (PDGFB)
   05218 Melanoma
    100388628 (PDGFB)
   05211 Renal cell carcinoma
    100388628 (PDGFB)
   05215 Prostate cancer
    100388628 (PDGFB)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    100388628 (PDGFB)
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    100388628 (PDGFB)
  09176 Drug resistance: antineoplastic
   01521 EGFR tyrosine kinase inhibitor resistance
    100388628 (PDGFB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and growth factors [BR:cjc04052]
    100388628 (PDGFB)
   00536 Glycosaminoglycan binding proteins [BR:cjc00536]
    100388628 (PDGFB)
Cytokines and growth factors [BR:cjc04052]
 Growth factors
  Growth factors (RTK binding)
   100388628 (PDGFB)
Glycosaminoglycan binding proteins [BR:cjc00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   100388628 (PDGFB)
SSDB
Motif
Pfam: PDGF PDGF_N
Other DBs
NCBI-GeneID: 100388628
NCBI-ProteinID: XP_008977678
Ensembl: ENSCJAG00000011366
LinkDB
Position
1
AA seq 210 aa
MLSGRSIRSFDDLQRLLQGDSGEEDGAELDLNMTRSHSGGELESLARGRRSLGSLSVAEP
AMIAECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNVQCRPTQVQLRPV
QVRKIEIVRKKPIFKKATVTLEDHLACKCETVAAARPVTRSPGSSQEQRAKTPQTRVTIR
TVRVRRPPKGKHRKFKHTHDKAALKETLGA
NT seq 633 nt   +upstreamnt  +downstreamnt
atgctgagtggccgctccatccgatcctttgacgacctccagcgcctgctgcagggagac
tccggagaggaagatggggctgagctggacctgaacatgacccgctcacattctggaggc
gagctggagagcttggctcgtgggagaaggagcctgggttccctgagcgttgccgagcca
gccatgatcgccgagtgcaagacgcgcactgaggtgttcgagatctcccggcgcctcatt
gaccgcaccaatgccaacttcctggtgtggcctccctgcgtggaggtgcagcgctgctct
ggctgttgcaacaaccgcaacgtgcaatgccggcccacccaggtgcagctgcgaccagtc
caggtgagaaagatcgagattgtgcggaagaagccaatctttaaaaaggccacggtgacg
ctggaggaccacctggcatgcaagtgtgagacagtggcggctgcacggcctgtgacccga
agcccggggagttcccaggagcagcgagccaaaacgccccaaactcgggtgaccatccgg
acggtgagagtccgccggccccccaagggcaagcaccggaaattcaagcacacgcatgac
aaggcggcactgaaggagaccctcggagcctag

KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100388651
Entry
100388651         CDS       T03264                                 

Gene name
EGF
Definition
(RefSeq) epidermal growth factor
  KO
K04357  epidermal growth factor
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc01521  EGFR tyrosine kinase inhibitor resistance
cjc04010  MAPK signaling pathway
cjc04012  ErbB signaling pathway
cjc04014  Ras signaling pathway
cjc04015  Rap1 signaling pathway
cjc04020  Calcium signaling pathway
cjc04066  HIF-1 signaling pathway
cjc04068  FoxO signaling pathway
cjc04072  Phospholipase D signaling pathway
cjc04151  PI3K-Akt signaling pathway
cjc04510  Focal adhesion
cjc04540  Gap junction
cjc04630  JAK-STAT signaling pathway
cjc04810  Regulation of actin cytoskeleton
cjc05160  Hepatitis C
cjc05165  Human papillomavirus infection
cjc05200  Pathways in cancer
cjc05210  Colorectal cancer
cjc05212  Pancreatic cancer
cjc05213  Endometrial cancer
cjc05214  Glioma
cjc05215  Prostate cancer
cjc05218  Melanoma
cjc05219  Bladder cancer
cjc05223  Non-small cell lung cancer
cjc05224  Breast cancer
cjc05226  Gastric cancer
cjc05231  Choline metabolism in cancer
cjc05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    100388651 (EGF)
   04012 ErbB signaling pathway
    100388651 (EGF)
   04014 Ras signaling pathway
    100388651 (EGF)
   04015 Rap1 signaling pathway
    100388651 (EGF)
   04630 JAK-STAT signaling pathway
    100388651 (EGF)
   04066 HIF-1 signaling pathway
    100388651 (EGF)
   04068 FoxO signaling pathway
    100388651 (EGF)
   04020 Calcium signaling pathway
    100388651 (EGF)
   04072 Phospholipase D signaling pathway
    100388651 (EGF)
   04151 PI3K-Akt signaling pathway
    100388651 (EGF)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100388651 (EGF)
   04540 Gap junction
    100388651 (EGF)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    100388651 (EGF)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100388651 (EGF)
   05231 Choline metabolism in cancer
    100388651 (EGF)
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    100388651 (EGF)
  09162 Cancer: specific types
   05210 Colorectal cancer
    100388651 (EGF)
   05212 Pancreatic cancer
    100388651 (EGF)
   05226 Gastric cancer
    100388651 (EGF)
   05214 Glioma
    100388651 (EGF)
   05218 Melanoma
    100388651 (EGF)
   05219 Bladder cancer
    100388651 (EGF)
   05215 Prostate cancer
    100388651 (EGF)
   05213 Endometrial cancer
    100388651 (EGF)
   05224 Breast cancer
    100388651 (EGF)
   05223 Non-small cell lung cancer
    100388651 (EGF)
  09172 Infectious disease: viral
   05160 Hepatitis C
    100388651 (EGF)
   05165 Human papillomavirus infection
    100388651 (EGF)
  09176 Drug resistance: antineoplastic
   01521 EGFR tyrosine kinase inhibitor resistance
    100388651 (EGF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and growth factors [BR:cjc04052]
    100388651 (EGF)
Cytokines and growth factors [BR:cjc04052]
 Growth factors
  Growth factors (RTK binding)
   100388651 (EGF)
SSDB
Motif
Pfam: Ldl_recept_b FXa_inhibition EGF EGF_CA cEGF DUF5050 EGF_3
Other DBs
NCBI-GeneID: 100388651
NCBI-ProteinID: XP_002745534
Ensembl: ENSCJAG00000003982
LinkDB
Position
3
AA seq 1208 aa
MLLTLVILFTVVLKFSFVSLSAPQHWSCSEGTPAGNGNSTCVGPAPFLIFSHGNSIFRID
TEGTNYEQLVKNAGVSVIMDFHYSEKIIYWVDLERQLLQRVFLNGSRQERVCNIEKNVSG
MAINWINEEVIWSNQQEGIITVTDMKGNNSHVLFSALKDPANIAVDPVERFLFWSSEVAG
SLHRADLDGVEVKVLLETSEKITAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGSVQM
SKHHTQHNLFAMSLFGDHIFYSTWKTKTIWIANKHTGKDMVKINLKPSFVPPGELRVVHP
LTQPTAEDDTQKPEQKLCKSRKGNCSSTVCGQDPQSHLCTCTEGYALSRDRKYCEDVNEC
AFWNHGCTLGCKNTPGSYYCTCPVGFVVLLDGKRCHQLVSCPSNVSECSHDCVLTSEGPL
CFCPEGSVLERDGKTCSGCSSPDNGGCSQLCIPLSPVAWECDCFPGYDLQLDKKSCAASG
PQPFLLFANSQDIRQMHFDGTDYGTLLSQQMGMVYALDHDPVENKIYFAHTALKWIERAN
MDGSQRERLIEETVDVPEGLAVDWIGRRFYWTDRGKSLIGRSDLNGKHPEIIIKETMSQP
RGIAVHPMAKRLFWTDTGINPRIESSSLQGLGRLVLASSDLIWPSGITIDFLTDKLYWCD
AKQSVIEMANLDGSKRRRLTQNDVGHPFALAVFQDYVWFSDWAMPSVIRVNKRTGKDRVR
LRGSMLKPSSLVVIHPLAKPGADPCLYQNGGCEHICKERLGTAWCLCREGFMKAPDGKMC
LALDGHQLLAGGEADLKDPVTPLDTSSKTRVSEDNITESQHMLVAEILVSDQDDCAPVGC
SMHARCVSEGEDAMCQCLKGFAGDGKLCSDIDECEMGVPVCPPASSKCINTEGGYVCQCS
EGYQGDGIHCLDIDECQLGVHGCGENASCTNTEGGYACTCAGRLSEPGLICPDSTSPSHL
REDDHRYSVRNSDSGCPPSHSGYCLHDGVCMYIETVDKYACNCVVGYLGERCQYQDLKWW
ELRHAGYRQQRKVTVVAVCVVVFVVLLLLSLWGAHYYRTQKLLSKNPKNPYEESSRDVNS
RRPADSEAGMSSCPQPWFVVIKEHQDLGIGSQLEAGEDGHAADVGSVQPTSWSQEPHLCG
MGTEQGCWIPVSSDKGSCPQAMERTFHMPSHGTQPFDGVVEKPHSLLTANPLWQQRALDP
SHHMELTE
NT seq 3627 nt   +upstreamnt  +downstreamnt
atgctgctcactcttgtcattctgtttacagtagttttaaaatttagttttgttagtctg
tctgcaccgcagcactggagctgttctgaaggtactcccgcaggaaatgggaattctact
tgtgtgggtcctgcaccattcttaattttctcccatggaaatagtatctttaggattgac
acggaaggaaccaattatgagcaattggtgaagaatgctggtgtctcagtgatcatggat
tttcattatagtgagaaaataatctattgggtggatttagaaagacaacttttgcaaaga
gttttcctgaatgggtcaaggcaagagagagtgtgtaatatagagaaaaatgtttctgga
atggcaataaattggataaatgaagaagttatttggtcaaatcaacaggaaggaatcatt
acagtaacagatatgaaaggaaataattcccacgttcttttcagtgctttaaaagatcct
gcaaatatagcagttgatccagtagaaaggtttctattttggtcttcagaggtggctggc
agccttcacagagcagatctcgatggtgtggaagtaaaggttctgttagagacatcagag
aaaataacagctgtgtcattggatgtgcttgataagcggctgttttggattcagtacaac
agagaaggaagcaattctcttatttgttcctgtgattatgatggaggttctgtccagatg
agtaaacatcacacacagcacaatttgtttgcaatgtccctttttggtgaccatatcttc
tattcaacatggaaaacaaagacgatttggatagccaacaaacacactggaaaggatatg
gttaaaattaacctcaagccatcatttgtaccacctggtgaactgagagtagtgcatcca
ctcacacagcccacggcagaagatgatactcagaagcctgagcagaaactttgcaaatcg
aggaaaggaaactgcagcagcactgtgtgtgggcaagacccccagtcccacttgtgcaca
tgtacagagggatacgccttaagccgagaccggaagtactgtgaagatgttaatgaatgt
gccttttggaatcatggctgtactcttgggtgtaaaaacacccctggatcctattactgc
acatgccctgtaggatttgttgtgcttcttgatgggaaacgatgtcatcagcttgtttcc
tgtccaagcaatgtgtccgaatgcagccatgactgtgttctgacatcagaaggtcctcta
tgtttctgtcctgaaggctcagtgcttgagagagatgggaaaacatgtagtggttgttcc
tcacctgataatggtggatgtagccagctctgcattcctctaagcccagtagcctgggaa
tgcgattgctttcctgggtatgacctacaactggacaaaaaaagttgtgcagcttcagga
ccacaaccatttttgctgtttgccaattctcaagatattcgacaaatgcattttgatgga
acagactatggaactctgctcagccagcagatgggaatggtttatgccctagatcatgac
cctgtggaaaataagatatactttgcccacactgccctgaaatggatagagagagctaac
atggatggttcccagcgagaaaggctcattgaggaaacagtagatgtcccagaaggtctt
gctgtggactggattggccgtagattctattggacagacagagggaaatctctgattgga
aggagtgatttaaatggaaaacatcccgaaataataattaaggagaccatgtctcaacca
cgaggaattgctgttcatccaatggccaagagattattctggactgatacagggattaat
ccacgaattgaaagttcttccctccaaggccttggccgactggttttagccagctctgat
ctaatctggcccagtggaataacaatagacttcttaactgacaagttgtactggtgcgat
gccaagcagtctgtgattgaaatggccaatctggatggttcaaaacgccgaagacttacc
cagaacgatgtaggtcacccgtttgctctagccgtgtttcaggattatgtgtggttctca
gactgggctatgccatcagtaataagagtaaacaagaggactggcaaagatagagtacgt
ctccgaggcagcatgttgaagccctcgtcactggttgtgattcatccgttggcaaaacca
ggagcagatccctgcttatatcaaaatggaggctgtgaacatatttgcaaagagaggctt
ggaactgcttggtgtttgtgtcgtgaaggttttatgaaagccccagatgggaaaatgtgt
ctggctctggatggtcatcagctgttggcaggtggtgaagctgatctaaaggacccagta
acgccactggacacctcatccaagaccagagtgtctgaagataacatcacagagtctcaa
cacatgctagtggctgaaatcttggtgtcagatcaagatgactgtgctcctgtgggatgc
agcatgcatgctcggtgtgtttcagagggagaggatgccatgtgtcagtgtttgaaaggg
tttgctggggatggaaaactctgttctgatatagatgaatgtgagatgggtgtcccagtg
tgcccccctgcctcctccaagtgcatcaacactgaaggtggctatgtctgccagtgctca
gaaggctaccaaggagatgggattcactgtcttgatattgatgaatgccaactgggggtg
cacggctgtggagagaatgccagctgcacaaatacagagggaggctacgcctgcacgtgt
gctggacgcctgtctgaaccaggactgatttgccctgactctacttcaccctctcacctc
agggaagatgaccaccgatattccgtaagaaatagtgactctggatgtcccccgtcccac
agtgggtactgcctccatgatggtgtgtgcatgtatattgaaacagtggacaagtatgca
tgcaactgtgttgttggctacctcggggagcgatgtcagtaccaagacctgaagtggtgg
gaactgcgccacgctggctaccggcagcagcggaaggtcaccgtggtggctgtctgtgtg
gtggtgtttgtcgtgctgctcctcctgagcctgtggggggcccactactacaggactcag
aagctgctatcgaaaaatccaaagaatccttatgaggagtcgagcagagatgtgaacagt
cgcaggcctgctgacagtgaggctgggatgtcctcttgccctcaaccttggtttgtggtt
ataaaggaacaccaagaccttgggattgggagtcaactggaggctggtgaggatggtcat
gcagcagatgttgggtcagtgcaaccaacttcatggagtcaggagccccatttatgtgga
atgggcaccgagcaaggctgctggattccagtatccagtgataagggctcctgtccccag
gcaatggagcgaacctttcatatgccctcccatggaacacagccctttgatggggttgta
gagaagccccattctctcctgacagctaacccattatggcaacaaagggccctggaccca
tcacaccacatggagctgaccgagtga

KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100412906
Entry
100412906         CDS       T03264                                 

Gene name
PDGFA
Definition
(RefSeq) platelet derived growth factor subunit A
  KO
K04359  platelet-derived growth factor subunit A
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc01521  EGFR tyrosine kinase inhibitor resistance
cjc04010  MAPK signaling pathway
cjc04014  Ras signaling pathway
cjc04015  Rap1 signaling pathway
cjc04020  Calcium signaling pathway
cjc04072  Phospholipase D signaling pathway
cjc04151  PI3K-Akt signaling pathway
cjc04510  Focal adhesion
cjc04540  Gap junction
cjc04630  JAK-STAT signaling pathway
cjc04810  Regulation of actin cytoskeleton
cjc05200  Pathways in cancer
cjc05202  Transcriptional misregulation in cancer
cjc05206  MicroRNAs in cancer
cjc05214  Glioma
cjc05215  Prostate cancer
cjc05218  Melanoma
cjc05231  Choline metabolism in cancer
cjc05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    100412906 (PDGFA)
   04014 Ras signaling pathway
    100412906 (PDGFA)
   04015 Rap1 signaling pathway
    100412906 (PDGFA)
   04630 JAK-STAT signaling pathway
    100412906 (PDGFA)
   04020 Calcium signaling pathway
    100412906 (PDGFA)
   04072 Phospholipase D signaling pathway
    100412906 (PDGFA)
   04151 PI3K-Akt signaling pathway
    100412906 (PDGFA)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100412906 (PDGFA)
   04540 Gap junction
    100412906 (PDGFA)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    100412906 (PDGFA)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100412906 (PDGFA)
   05202 Transcriptional misregulation in cancer
    100412906 (PDGFA)
   05206 MicroRNAs in cancer
    100412906 (PDGFA)
   05231 Choline metabolism in cancer
    100412906 (PDGFA)
  09162 Cancer: specific types
   05214 Glioma
    100412906 (PDGFA)
   05218 Melanoma
    100412906 (PDGFA)
   05215 Prostate cancer
    100412906 (PDGFA)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    100412906 (PDGFA)
  09176 Drug resistance: antineoplastic
   01521 EGFR tyrosine kinase inhibitor resistance
    100412906 (PDGFA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and growth factors [BR:cjc04052]
    100412906 (PDGFA)
   00536 Glycosaminoglycan binding proteins [BR:cjc00536]
    100412906 (PDGFA)
Cytokines and growth factors [BR:cjc04052]
 Growth factors
  Growth factors (RTK binding)
   100412906 (PDGFA)
Glycosaminoglycan binding proteins [BR:cjc00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   100412906 (PDGFA)
SSDB
Motif
Pfam: PDGF_N PDGF
Other DBs
NCBI-GeneID: 100412906
NCBI-ProteinID: XP_017824812
Ensembl: ENSCJAG00000004948
UniProt: U3CXU3
LinkDB
Position
2
AA seq 211 aa
MRTWACLLLLGCGYLAHALAEEAEIPREVIERLAHSQIHSIRDLQRLLEIDSVGNEDALD
TSLRAHGVHATKHAPEKRPLPIRRKRSIEEAVPAVCKTRTVIYEIPRSQVDPTSANFLIW
PPCVEVKRCTGCCNTSSVKCQPSRVHHRSVKVAKVEYIRKKPKLKEVQVRLEEHLECACA
TTSLNPDYREEDTGRPRESGKKRKRKRLKPT
NT seq 636 nt   +upstreamnt  +downstreamnt
atgaggacctgggcttgcctgctgctcctcggctgcggatacctcgcccatgctctggcc
gaggaagccgagatcccccgcgaggtgatcgagaggctggcgcacagtcagatccacagc
atccgggacctccagcgactcctggagatagactccgtagggaatgaggatgctttggac
accagcttgagagctcacggggtccacgccaccaagcatgcacctgagaagcggcccctg
cccattcgaaggaagagaagtatcgaggaagctgttcccgctgtttgcaagaccaggaca
gtcatttatgagattcctcgaagccaggttgaccccacgtccgccaacttcctgatctgg
cccccgtgtgtggaggtgaagcgttgcaccggctgctgcaacaccagcagcgtcaagtgt
cagccctcccgcgtccaccaccgcagcgttaaggtggccaaggtggaatacatcaggaag
aagccaaaattaaaagaagtccaggtgaggttagaggagcatttggagtgcgcctgtgca
accaccagcctgaatccggattatcgggaagaggacacaggaaggcctagggagtcaggt
aaaaagcggaaaagaaaaaggttaaaacccacctaa

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