Callithrix jacchus (white-tufted-ear marmoset): 100389508
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Entry
100389508 CDS
T03264
Symbol
COLGALT2
Name
(RefSeq) procollagen galactosyltransferase 2 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc00310
Lysine degradation
cjc00514
Other types of O-glycan biosynthesis
cjc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100389508 (COLGALT2)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
100389508 (COLGALT2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cjc01003
]
100389508 (COLGALT2)
Enzymes [BR:
cjc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
100389508 (COLGALT2)
Glycosyltransferases [BR:
cjc01003
]
O-Glycan biosynthesis
O-linked Gal type
100389508 (COLGALT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Aminotran_4
Glyco_transf_92
Motif
Other DBs
NCBI-GeneID:
100389508
NCBI-ProteinID:
XP_008983097
Ensembl:
ENSCJAG00000005331
LinkDB
All DBs
Position
18:complement(35801981..35912295)
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AA seq
626 aa
AA seq
DB search
MAARPAATLAWSLLLLYSALLREGCRARFAAELDSEDDGEEPAVFLESPLQSPTVLVAVL
ARNAAHSLPHFLGCLERLDYPKSRMAVWAATDHNVDNTTEILREWLKNVQRLYHYVEWRP
MDEPESYPDEIGPKHWPSSRFAHVMKLRQAALRTAREKWSDYILFIDVDNFLTNPQTLNL
LIAENKTIVAPMLESRGLYSNFWCGITPKGFYKRTPDYVQIREWKRTGCFPVPMVHSTFL
IDLRKEASDKLTFYPPHQDYTWTFDDIIVFAFSSRQAGIQMYLCNREHYGYLPIPLKPHQ
TLQEDIENLIHVQIEAMIDRPPMEPSQYVSVVPKYPDKMGFDEIFMINLKRRKDRRDRML
RTLYEQEIEVKIVEAVDGKALNTSQLKSLNIEMLPGYRDPYSSRPLTRGEIGCFLSHYSV
WKEVIDRELEKTLVIEDDVRFEHQFKKKLMKLMDDIDQAQLDWELIYIGRKRMQVKEPEK
AVPNVENLVEADYSYWTLGYVISLEGAQKLVGANPFGKMLPVDEFLPIMYNKHPVAEYKE
HYESRDLKAFSAEPLLIYPTHYTGQPGYLSDTETSTIWDNETVATDWDRTHAWKSRKQSR
IYSNAKNTEALPPPTSLDTVPSRDEL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcgccctgccgccaccctcgcctggtcgctgctgctcctttactcagccctg
ctccgcgaaggctgccgggcgcgcttcgccgccgaactggactcggaggacgacggagag
gagccggcggttttcctggagtcgcccctgcagagccccacggtgctcgtggctgtcctc
gcccgcaacgcggcgcactcactgccgcacttcctaggctgcctggagcggctggactac
cccaagagcaggatggccgtctgggcagccactgatcacaatgtggataatacaaccgaa
atactcagggagtggttgaaaaatgtacagagactctatcactatgtggagtggaggcct
atggatgaaccagagtcttatcctgatgaaattggaccaaagcactggccaagctcccgg
tttgcccatgtgatgaaactacgacaggcagcccttcgaactgcgagggaaaaatggtca
gactacattctgttcatagatgtcgacaatttcctgactaatccacagaccctcaatcta
ctgattgcagaaaacaaaactatcgtggcccccatgctggagtctcggggcctgtattct
aatttctggtgtggaatcacccctaagggcttctataagaggaccccagactacgttcag
attcgagagtggaagaggacaggctgcttccccgtccccatggtccactccaccttccta
attgacctcaggaaggaggcctcagacaagctgactttctaccccccacaccaggactac
acttggacgtttgatgacatcatcgtctttgccttctccagcaggcaagcaggcatccag
atgtacctctgcaacagagagcactatggctacctgcccatccccctgaagccccatcaa
acgctgcaggaggacatcgagaacctcatccacgtgcagattgaagcaatgattgatcgt
cctccaatggaaccctcccagtatgtctcagttgtccctaaatatccagacaagatggga
tttgatgagattttcatgataaacctcaagcgcagaaaggaccggcgggaccggatgctg
cgcacactgtatgagcaggagattgaggtcaagattgtcgaggctgtggatggaaaggca
ctcaacacaagccagctgaagtccctgaatattgaaatgctccctggctatcgagatccc
tattcctccaggcctctaaccaggggcgaaattggctgctttctcagccactactcagtc
tggaaagaggtaattgaccgagaactagagaagactcttgtaattgaagatgatgtgcgt
tttgagcatcagtttaagaagaagctaatgaagctgatggatgatatcgaccaggctcag
ctggactgggaactgatttatattggtaggaagaggatgcaagtgaaggaaccagaaaaa
gcggtgcccaatgtggaaaacctggtcgaagctgactattcctactggaccctgggctac
gtcatctctctggaaggagcacagaagctggttggagccaatcctttcgggaagatgctg
ccagtggacgagtttctgccaatcatgtacaacaagcatcctgtagctgagtacaaggag
cattatgaatccagggacctgaaagccttctctgcagaacccttgctcatctaccctaca
cactacacaggccagccggggtacttgagtgacacggagacctccaccatctgggacaac
gagacagtggccactgactgggataggacacatgcctggaagtcccggaagcaaagtcgc
atctacagcaatgccaagaacacagaggccctgccaccgccaacctccctggacactgtg
ccttcgagggacgagctgtga
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