Callithrix jacchus (white-tufted-ear marmoset): 100389730
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Entry
100389730 CDS
T03264
Symbol
TYW1
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1 isoform X1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjc03016
]
100389730 (TYW1)
Enzymes [BR:
cjc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
100389730 (TYW1)
Transfer RNA biogenesis [BR:
cjc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100389730 (TYW1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
100389730
NCBI-ProteinID:
XP_008979519
Ensembl:
ENSCJAG00000004295
LinkDB
All DBs
Position
2:1648500..1898342
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AA seq
732 aa
AA seq
DB search
MDPSMDTWDLSSPLISLWINRFYIYLGFAFSISLWICVQIVIKKQDRNIQENSFPKTTQD
LMRNGYVSLQKKDIFVPGVKIFYGSQTGTAKGFATVLAEAVVSLDLPVAIINLKEYDPDD
CLIEEVTGKHVCVFLVATYTDGRPTESAEWFCSWLEDASRDFRFGKTYLKGMRYAVFGLG
NSAYASHFNKVGKNVDKWLWMLGAHRVVSRGEGDCDVVKSKHGSIEADFRAWKAMFISQL
QALQKGERKKSCGGHCKKGKCKSQQHGSEEREEGSLEQDELHHRDTEEEEPSEGSSGEEF
GGEDQQSVNSIVDVEDLGKIMDHMKKEKREKEQQEAKTSLLVNMGRNEDGEGRAMITPAL
REALTKQGYQLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACANKC
VFCWRHHTNPVGTAWRWKMDQPEMILKEAIENHQNMIKQFKGVPGVKAERFEEGMAVKHC
ALSLVGEPIMYPEINSFLKLLHQRRISSFLVTNAQFPAEIRNLKPVTQLYVSVDASTKES
LKKIDRPLFKDFWQRFLDSLKALAAKQQRTVYRLTLVKAWNVDELQAYAQLVSLGNPDFI
EVKGVTYCGESSASSLTMAHVPWHEEVVQFVLELVDLIPDYEIACEHEHSNCLLIAHKKF
KIGSEWWTWIDYNRFQELIQEYEDSGGSKTFSAKDYMARTPHWALFGASERGFDPKDTRH
QRKNKSKAISGC
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggatccttctatggatacatgggacctctcctcacctttaatatcattatggataaac
aggttttacatttatttgggctttgcctttagcattagcctttggatttgtgtccagatt
gtcatcaagaagcaggacaggaacatacaggaaaactcttttccaaaaacaactcaagat
ttgatgagaaatggttatgtttcccttcaaaagaaagacatctttgtgcctggagtgaaa
attttctatggatctcagactggtacagcaaagggatttgcaacagttcttgctgaagca
gttgtgtccctggatctgcctgtggcaattattaatctaaaagaatatgatccggatgat
tgtctgatagaagaggttactggtaaacatgtctgtgtcttcctggtggcgacatacact
gatggccgaccaaccgaaagcgcagagtggttttgcagctggttagaggacgcgtcccgt
gattttcgattcggcaaaacttacctgaagggtatgagatacgcggtgtttggcctggga
aattctgcctatgccagccacttcaacaaggttggcaaaaacgttgacaagtggctctgg
atgcttggtgcgcatcgcgtggtgagtcgaggggagggtgactgcgatgtggttaaaagc
aagcatggcagcatcgaggccgacttcagagcctggaaggccatgttcatctcccagctg
caggcacttcagaaaggggagagaaagaagtcctgtggcggccactgcaagaaaggcaaa
tgtaaatctcagcaacatggctcagaggagagggaggaaggctctctcgagcaggatgaa
ttacatcacagagataccgaggaggaagaaccctccgagggctccagtggagaagagttt
ggtggtgaggaccagcagagtgtaaattccattgttgatgttgaagatcttggcaaaata
atggatcatatgaagaaagaaaagagagaaaaggaacagcaggaagcgaagactagtttg
ttggtgaacatggggaggaacgaagatggtgaaggaagagctatgataactcctgctctc
cgagaagcccttactaaacaaggttatcagttgattgggagccactctggggtgaagctt
tgcaggtggacaaagtcgatgctccgggggagaggaggttgttacaaacacacattctat
ggaattgagagccatcgctgcatggaaaccactccgagcttggcgtgtgctaataaatgt
gtcttctgttggcggcaccacaccaacccagtgggcactgcatggcggtggaagatggac
cagcctgaaatgatcttgaaggaagccatcgaaaaccatcagaacatgattaagcagttt
aaaggagtccctggtgtcaaagcagagcgctttgaagaaggaatggcggtaaagcactgc
gcgttgtccctcgtgggagagccaattatgtacccagagatcaacagctttttgaagtta
ctccaccagcgtagaatctccagtttcttggtgacaaatgcacagttccctgcagaaatc
aggaacctcaagccagttactcagctgtatgtcagtgtggatgccagcaccaaagaaagt
ctgaagaaaatcgaccgcccactcttcaaggatttctggcagagattccttgacagttta
aaagccttggcagccaagcaacaacgaactgtctacagactgacgcttgtgaaagcgtgg
aacgtggacgagctccaggcctacgcgcagctcgtgtccctggggaatcctgacttcatc
gaagtgaagggtgttacctactgtggagaaagttcagcaagcagtcttaccatggcccac
gtgccctggcatgaggaagtggtgcagtttgtccttgagctggtggatctgatccctgac
tatgagattgcatgtgaacacgaacactctaactgcctcctgatagcgcacaaaaagttt
aagattggtagtgaatggtggacctggatcgattataaccgcttccaggagctcatccag
gaatacgaagatagcggtggatcaaaaactttcagcgcaaaggattatatggccagaact
cctcactgggcattatttggtgccagtgaaagaggctttgatcccaaggacacaagacat
cagagaaagaacaaatcaaaggctatttctggatgttga
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