Callithrix jacchus (white-tufted-ear marmoset): 100395364
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Entry
100395364 CDS
T03264
Gene name
TRAF6
Definition
(RefSeq) TNF receptor associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04010
MAPK signaling pathway
cjc04064
NF-kappa B signaling pathway
cjc04120
Ubiquitin mediated proteolysis
cjc04140
Autophagy - animal
cjc04144
Endocytosis
cjc04380
Osteoclast differentiation
cjc04620
Toll-like receptor signaling pathway
cjc04621
NOD-like receptor signaling pathway
cjc04622
RIG-I-like receptor signaling pathway
cjc04657
IL-17 signaling pathway
cjc04722
Neurotrophin signaling pathway
cjc05132
Salmonella infection
cjc05133
Pertussis
cjc05135
Yersinia infection
cjc05140
Leishmaniasis
cjc05142
Chagas disease
cjc05145
Toxoplasmosis
cjc05152
Tuberculosis
cjc05160
Hepatitis C
cjc05161
Hepatitis B
cjc05162
Measles
cjc05168
Herpes simplex virus 1 infection
cjc05169
Epstein-Barr virus infection
cjc05170
Human immunodeficiency virus 1 infection
cjc05171
Coronavirus disease - COVID-19
cjc05200
Pathways in cancer
cjc05222
Small cell lung cancer
cjc05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100395364 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100395364 (TRAF6)
04064 NF-kappa B signaling pathway
100395364 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100395364 (TRAF6)
04140 Autophagy - animal
100395364 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100395364 (TRAF6)
04621 NOD-like receptor signaling pathway
100395364 (TRAF6)
04622 RIG-I-like receptor signaling pathway
100395364 (TRAF6)
04657 IL-17 signaling pathway
100395364 (TRAF6)
09156 Nervous system
04722 Neurotrophin signaling pathway
100395364 (TRAF6)
09158 Development and regeneration
04380 Osteoclast differentiation
100395364 (TRAF6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100395364 (TRAF6)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
100395364 (TRAF6)
09162 Cancer: specific types
05222 Small cell lung cancer
100395364 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
100395364 (TRAF6)
05135 Yersinia infection
100395364 (TRAF6)
05133 Pertussis
100395364 (TRAF6)
05152 Tuberculosis
100395364 (TRAF6)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100395364 (TRAF6)
05161 Hepatitis B
100395364 (TRAF6)
05160 Hepatitis C
100395364 (TRAF6)
05171 Coronavirus disease - COVID-19
100395364 (TRAF6)
05162 Measles
100395364 (TRAF6)
05168 Herpes simplex virus 1 infection
100395364 (TRAF6)
05169 Epstein-Barr virus infection
100395364 (TRAF6)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
100395364 (TRAF6)
05140 Leishmaniasis
100395364 (TRAF6)
05142 Chagas disease
100395364 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100395364 (TRAF6)
04121 Ubiquitin system [BR:
cjc04121
]
100395364 (TRAF6)
Enzymes [BR:
cjc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100395364 (TRAF6)
Membrane trafficking [BR:
cjc04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
100395364 (TRAF6)
Ubiquitin system [BR:
cjc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
100395364 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-TRAF
TRAF6_Z2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-TRAF_2
zf-RING_5
SlyX
Med21
DUF16
U-box
Tropomyosin_1
UPF0242
Spc29
PspA_IM30
Sina
DUF1664
DM
Motif
Other DBs
NCBI-GeneID:
100395364
NCBI-ProteinID:
XP_002755232
Ensembl:
ENSCJAG00000011070
UniProt:
U3DER5
LinkDB
All DBs
Position
11
AA seq
523 aa
AA seq
DB search
MSLLNCENSCGSSQSESDCCGAMASSCSAATKDDSVGGTASTGNLSSSFMEEIQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLMVRCPNEGCLHKMELRHLEDHQVHCEFALMDCPQCQRPFQKCQINIHILK
DCPRRQVSCVNCAASMAFEDKEIHDQNCPLANVVCEYCNTVLIREQMPNHYDLDCPTAPI
PCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVHSLSLTLTPAPPTPEVWNFQETI
HQLEGRLVRQDHQIRELTAKMETQGMYVNELRRTIRTLEDKVAEIEAQQCNGIYIWKIGN
FGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYD
SHLPWPFQGTIRLTILDQSEAPVRQNHEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHL
EALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDTGV
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgagtctactaaattgtgaaaacagctgtggatccagccagtctgaaagtgactgctgt
ggggccatggccagctcctgtagcgctgcaacaaaagatgatagtgtgggtggaactgcc
agcacggggaacctctccagctcctttatggaggagatccagggatatgatgtggagttt
gacccacccctggaaagcaagtatgaatgccccatctgcttgatggcattacgagaagca
gtgcaaacaccgtgcggccataggttctgcaaagcctgcatcataaaatcaataagggat
gcaggtcacaaatgtccagttgacaacgaaatactgctggaaaatcaactatttccagac
aattttgcaaaacgtgagattctttctctgatggtgaggtgtccaaatgaaggttgtttg
cacaagatggaactgaggcatcttgaggatcatcaagtacattgcgagtttgctcttatg
gattgtccccaatgccagcgtcctttccaaaaatgccaaattaatattcacattctgaag
gattgtccaaggagacaggtttcttgtgtaaactgtgctgcatcaatggcatttgaagat
aaagagatccatgaccagaactgtcctttggcaaatgtcgtctgtgaatactgcaatact
gtactcatcagagaacagatgcctaatcattatgatctagactgccctacagccccaatt
ccatgcacattcagtacttttggttgccatgaaaagatgcagaggaatcacttggcacgc
cacctgcaggagaacacccagtcacacatgagaatgttggcccaggctgttcatagcttg
agccttactttaactcccgctcctcccactcctgaggtctggaatttccaggaaactatt
caccagttagagggtcgccttgtaagacaagaccatcaaatccgagagctgactgctaaa
atggaaactcagggtatgtatgtaaatgagctcaggcgaaccattcgaacccttgaggac
aaagttgctgaaattgaagcacagcagtgcaatggaatttatatttggaagattggcaac
tttggaatgcatctgaaatgtcaagaagaggagaaacctgttgtgattcacagccctgga
ttctacacaggcaaacccgggtataaactgtgcatgcgcttgcaccttcagttaccgact
gctcagcgctgtgcaaactatatatccctgtttgtccacacaatgcaaggagagtatgac
agccacctcccttggcccttccagggtacaatacgccttacaattcttgatcagtctgaa
gcacctgtaagacaaaaccacgaagagataatggatgccaaaccagagctgcttgctttc
cagcgacccacaatcccacggaacccaaaaggttttggctatgtaacttttatgcatctg
gaagccctaagacaaagaactttcattaaggatgacacattattagtgcgctgtgaggtc
tccacccgctttgacatgggtagccttcggagggagggttttcagccacgaagtactgat
acaggagtgtag
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integrated database retrieval system
