KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100398509Help
Entry
100398509         CDS       T03264                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    100398509 (LIG4)
Enzymes [BR:cjc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     100398509 (LIG4)
DNA repair and recombination proteins [BR:cjc03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     100398509 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT DNA_ligase_IV DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme APG17 LIG3_BRCT
Motif
Other DBs
NCBI-GeneID: 100398509
NCBI-ProteinID: XP_008998912
Ensembl: ENSCJAG00000014689
LinkDB All DBs
Position
1
AA seq 911 aa AA seqDB search
MAASQTSQTVASHVPFADLCSTLERIQKTKGRAEKIRHFREFLDSWRNFHDALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHG
DSGDFAMIAYFVLKPRCLQKGSLTIQQVNDLLDSVASNNSAKRKDLVKKSLLQLITQSSA
LEQKWLIRMIIKDLKLGVSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIADIEHIEKDMKHQTFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTD
QFGASPTEGSLTPFIHNAFQTDIHICILDGEMMAYNPNTQTFMQKGIKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGHETLRKRYEILNSIFTPIPGRIEVVQKTQAHTKDEVIDALNE
AIDKREEGIMIKRPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGSRGGMM
SHFLCAVAEKPPPGKKPSVFHTLSRVGSGCTMKELYDLGLRLAKYWRPFHKKTPPSSILC
GTEKPEVYIEPCNSVIVQIKAAEIVPSDIYKTGCTLRFPRIEKIRDDKEWHECMTLDDLE
QLRGKASGKLASKHFYVGGDDGPPEKKRKAPPKMKKVIGIIEHLKAPNLTNVNKISNIFE
DVVFCVMSGTDSQPKSDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIILSNKYDV
VKPAWLLECFKTKSFVPWQPCFMIHMCPSTKEHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKNSNKLTPEEMASVIADLEHRYSWDRSPLSMFRRHTIYLDLYAVINDLSTKTEGTRLAI
KALELRFHGGTVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFKILKDSWVTDSIDK
CELQEENQYLI
NT seq 2736 nt NT seq  +upstreamnt  +downstreamnt
atggctgcctcacaaacttcacaaactgttgcatctcacgttccttttgcagatttgtgt
tcaactttagaacgaatacagaaaactaaaggacgtgcagaaaaaatcagacactttagg
gaatttttagattcttggagaaattttcatgatgctcttcataagaaccaaaaagatgtc
acagactctttttatcctgcaatgaggctaattcttcctcagctagaaagagagagaatg
gcctatggcattaaagaaactatgcttgctaagctttatattgaattgcttaatttacct
agagatggaaaagatgccctcaaacttttaaactacagaacacccactggaactcatgga
gattctggagactttgcaatgattgcatattttgtgttgaagccaagatgtttacagaaa
ggaagtttaaccatacagcaagtaaatgaccttttagactcggttgccagcaataattct
gctaaaagaaaagacctagtaaaaaagagtcttcttcaacttataactcagagttctgca
cttgagcaaaagtggcttattcggatgatcataaaggatttaaagcttggagttagtcag
caaactatcttttctgtttttcataacgatgctgctgagttgcataatgtcactacagat
ctggaaaaagtctgtaggcaactgcatgatccttctgtaggactcagtgatatttctatc
actttattttctgcctttaaaccaatgctagctgctattgcagatattgagcacattgag
aaggatatgaaacatcagactttctacatagaaaccaagctagatggtgaacgtatgcaa
atgcacaaagatggagatgtatacaaatacttctcccgaaatggatataactatactgat
cagtttggtgcttctcctactgaaggttctcttaccccattcattcataatgcattccaa
acagatatacacatctgtattcttgatggtgagatgatggcctataatcctaatacacaa
actttcatgcaaaagggaattaagtttgatattaaaagaatggtagaagattctgatctg
cagacttgttattgtgtttttgatgtattgatggttaataataaaaagctagggcatgag
actctgagaaagaggtatgagattcttaatagtatttttacaccaattccaggtagaata
gaagtagtgcagaaaacacaagctcatactaaggatgaagtaattgatgcattgaatgaa
gcaatagataaaagagaagaaggaatcatgataaaacgtcctctatccatctacaaacca
gacaaaagaggtgaagggtggttaaaaattaaaccagaatatgtcagtggactaatggat
gaattggacattttaattgttggaggatattggggtaaaggatcgcggggtggaatgatg
tctcattttttgtgtgcagtagcagagaagcccccacctggtaaaaagccatctgtgttt
catactctctctcgtgttggctctggttgtaccatgaaagaactgtatgatctgggtctg
aggttggccaaatactggaggccttttcataaaaaaactccaccaagtagcattttatgt
ggaacagagaagccagaagtgtacattgaaccttgtaattctgtcattgttcagattaag
gcagcagagatagtacccagtgatatatataaaactggctgtaccttgcgttttccacga
attgagaagataagagatgacaaagagtggcatgagtgcatgacactggatgacctagaa
caattaaggggaaaagcatctggaaagctcgcatctaaacacttttatgtaggtggtgat
gacggaccaccagaaaaaaagcggaaagctcccccaaaaatgaagaaagttattggaatt
attgagcacttaaaagcacctaaccttactaacgtaaacaaaatttctaatatatttgaa
gatgtagtgttttgtgttatgagtggaacagatagccagccaaaatctgacctggagaac
agaattgcagaatttggtggttatatagtacaaaacccaggcccagacacatactgtgta
attgcagggtctgagaacatcagagtaaaaaacataattttgtcaaataaatatgatgtt
gtcaagcctgcatggcttttagaatgttttaagaccaaaagctttgtgccatggcagcct
tgctttatgattcatatgtgtccatcaaccaaagaacatttcgcccgtgaatatgattgc
tatggtgatagttattttgttgatacagacttgaaccaactgaaagaagtattctcagga
attaaaaattctaacaagctcactcctgaagaaatggcttctgtgattgctgatttagag
catcggtattcctgggatcgctcccctctcagtatgtttcgacgccacaccatttatttg
gacttgtatgctgtaattaatgacctgagtaccaaaactgaggggacgagattagctatt
aaagccttggagcttcgatttcatggaggaacagtagtttcttgtttagctgagggagtg
tctcatgtaatcattggggaagatcatagtcgtgttgcagatttcaaagcttttagaaga
acttttaagagaaaatttaaaatcctgaaagacagttgggtaactgattcaatagacaag
tgtgaattacaagaagaaaaccaatatttgatttaa

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