Callithrix jacchus (white-tufted-ear marmoset): 100405104
Help
Entry
100405104 CDS
T03264
Symbol
TBP
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03022
Basal transcription factors
cjc05016
Huntington disease
cjc05017
Spinocerebellar ataxia
cjc05165
Human papillomavirus infection
cjc05166
Human T-cell leukemia virus 1 infection
cjc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100405104 (TBP)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100405104 (TBP)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100405104 (TBP)
05165 Human papillomavirus infection
100405104 (TBP)
09164 Neurodegenerative disease
05016 Huntington disease
100405104 (TBP)
05017 Spinocerebellar ataxia
100405104 (TBP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100405104 (TBP)
03021 Transcription machinery [BR:
cjc03021
]
100405104 (TBP)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
100405104 (TBP)
Transcription machinery [BR:
cjc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100405104 (TBP)
RNA polymerase III system
TFIIIB
100405104 (TBP)
RNA polymerase I system
SL1/TIF-1B
100405104 (TBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DDHD
EPL1
Peptidase_S64
STAC2_u1
BAF1_ABF1
Tra1_central
DUF4746
PAT1
Cellulose_synt
TFIIA
CNDH2_M
Motif
Other DBs
NCBI-GeneID:
100405104
NCBI-ProteinID:
XP_002747248
Ensembl:
ENSCJAG00000020638
LinkDB
All DBs
Position
4:173358078..173377296
Genome browser
AA seq
332 aa
AA seq
DB search
MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQ
QQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATSQQATQGTSGQAPQLFHSQTL
TTAPLPGTTPLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRA
RNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFP
AKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVS
GKVVLTGAKVRAEIYEAFENIYPILKGFRKTT
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaacaacagcctgccaccttacgctcagggcttggcctcccctcagggtgcc
atgactcctggaatccctatctttagtccaatgatgccttatggcactggactgacccca
cagcctattcagaacaccaatagtctgtctattttggaagagcaacaaaggcagcagcag
cagcaacagcagcagcagcagcagcagcagcagcagcagcagcagcaacaacagcagcaa
cagcagcaggcagtggcagccgcagccgttcagcagtcaacatcccagcaggcaacgtcc
cagcaggcgacacagggaacctcaggccaggcaccacagctcttccactcacagactctc
acaactgcacccttgccaggcaccactccactgtatccctcccccatgacccccatgacg
cccatcactcctgccacaccggcttctgagagctctgggattgtaccgcagctgcaaaat
attgtatccacagtgaatcttggttgtaaacttgacctaaagaccattgcacttcgtgcc
cgaaatgccgaatataatcccaagcggtttgctgctgtaatcatgaggataagagagcca
cgaaccacggcactaattttcagttctgggaaaatggtgtgcacaggagccaagagtgaa
gaacagtctagactggcagcaagaaaatacgctagagttgtacagaagttgggttttcca
gctaagttcttggacttcaagattcagaacatggtggggagctgtgatgtgaagttccct
ataaggttagaaggccttgtgctcacccaccaacagtttagtagttatgagcctgagtta
tttcctggtttaatctacagaatgatcaaacccagaattgttcttcttatttttgtttct
ggaaaagttgtattaacaggtgctaaagtcagagcagaaatttatgaagcatttgaaaac
atctaccctattctaaaggggttcaggaaaacgacgtaa
DBGET
integrated database retrieval system
