KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100405184
Entry
100405184         CDS       T03264                                 
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
  KO
K06237  collagen type IV alpha
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04151  PI3K-Akt signaling pathway
cjc04510  Focal adhesion
cjc04512  ECM-receptor interaction
cjc04926  Relaxin signaling pathway
cjc04933  AGE-RAGE signaling pathway in diabetic complications
cjc04974  Protein digestion and absorption
cjc05146  Amoebiasis
cjc05165  Human papillomavirus infection
cjc05200  Pathways in cancer
cjc05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    100405184 (COL4A2)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100405184 (COL4A2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100405184 (COL4A2)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    100405184 (COL4A2)
  09154 Digestive system
   04974 Protein digestion and absorption
    100405184 (COL4A2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100405184 (COL4A2)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    100405184 (COL4A2)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100405184 (COL4A2)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    100405184 (COL4A2)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    100405184 (COL4A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cjc04147]
    100405184 (COL4A2)
   00536 Glycosaminoglycan binding proteins [BR:cjc00536]
    100405184 (COL4A2)
Exosome [BR:cjc04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   100405184 (COL4A2)
Glycosaminoglycan binding proteins [BR:cjc00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   100405184 (COL4A2)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 100405184
NCBI-ProteinID: XP_035149830
Ensembl: ENSCJAG00000014238
LinkDB
Position
1:25214223..25424557
AA seq 1711 aa
MGRNQRAAAGPALPRWLLLGTVTVGFLSQSVLAGVKKSDVPCGGRDCSGGCQCFPEKGGR
GQPGPVGPQGYTGPPGLQGFPGLQGRKGDKGERGAPGITGPKGDVGARGVSGFPGADGIP
GHPGQGGPRGRPGYDGCNGTQGDSGPQGPPGSEGFTGPPGPQGPKGQKGEPYALPKEERD
RYRGEPGEPGLVGFQGPPGRPGPVGQMGPVGAPGRPGPPGPPGPKGQQGNRGLGFYGVKG
EKGDVGQPGPNGIPPETHPVIAPTRVTHHPEQDKGEKGSEGEPGIKGISLKGEEGIMGFP
GPRGYPGLSGEKGSPGQKGSRGLDGYQGSDGPRGPKGETGDPGPPGLPAYSPHPSLAKGA
RGDPGFPGARGEPGSQGEPGDPGPRGPPGISITAEDLGRGLPGEMGPKGFIGDPGIPALY
PGPPGLDGKPGLPGPPGLPGPPGPDGFLFGLKGAEGRGGFPGLSGSPGARGQKGRKGDAG
DCRCVEGDEAVRGLPGLPGPKGFPGINGEPGRKGDRGDPGQHGLPGFSGLKGVPGNLGAP
GPKGAKGDSRTITTKGERGQPGVPGVPGMKGDDGIPGREGLDGFPGLPGPPGDGIKGPPG
DPGYPGIPGTKGSPGEMGPPGLGLPGFKGQRGFPGDAGLPGPRGFPGPPGPPGTPGQADC
DPDVRRPIAGDRQEAVQPGCAGGPKGLPGLPGPPGPTGAKGLRGTPGFSGADGGAGPKGL
PGDPGREGFPGPPGFIGPRGSKGAAGLPGPDGLPGPVGLPGPVGPPGDKGLPGEVLGAQP
GPRGDAGVPGHPGLKGLPGDRGTPGFRGSQGMPGMPGLKGQLGFPGPSGQPGLSGPPGQH
GFPGAPGPEGPLGLPGTLGLGGLPGDRGEPGDVGAPGPVGMKGVSGDTGDAGLAGERGRP
GSPGFKGIDGMPGAPGLKGERGSPGMDGFQGMPGLKGRPGIPGSKGEAGFFGIPGLKGLA
GEPGFKGSRGDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGAKGTQGMPGIPGLSG
IPGLPGRPGHIKGLKGDIGAPGIPGLPGFPGVAGPPGITGFPGFTGSRGDKGAPGRAGLY
GEAGQTGDFGDIGDTINLPGRPGLKGERGTAGIPGLKGFFGEKGTEGDIGFPGITGVTGV
QGPPGLKGQAGFPGLTGPPGPQGEPGRIGLPGGKGDDGWPGAPGLPGFPGPRGISGLHGL
PGTKGFPGSPGADIHGDPGYSGPPGERGDPGEANTLPGPVGVPGQKGEQGAPGQRGPPGS
PGLQGFPGITPPSNISGAPGDKGAPGIFGLKGYRGPPGPPGSAALPGSKGDTGNPGAPGT
PGTKGWVGDPGPQGRPGVLGLPGEKGPRGEQGFMGNPGLPGPVGDRGPKGPKGDPGFPGA
PGIVGAPGIAGIPQKIATQPGTVGPQGRRGPPGAPGEMGPQGPPGEPGFRGAPGKAGPQG
RGGVSAVPGFRGDEGPTGHQGPIGQEGVPGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQE
PMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRN
DKSYWLSTTAPLPMMPVAEDEIKPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWI
GYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIPE
QSFQGSPSADTLKAGLIRTHISRCQVCMKNL
NT seq 5136 nt   +upstreamnt  +downstreamnt
atggggagaaaccagcgcgcggcggccggccctgccctaccacggtggctgctgctgggg
accgtgaccgtggggttcctctcccagagcgtcttggcgggtgtgaagaagtctgatgtg
ccgtgtggcggaagagattgcagtgggggctgccagtgcttccctgagaaaggcggacgc
ggtcagcctgggccagtgggcccccaggggtacactgggccaccaggactgcaaggattc
ccgggactgcagggccgcaaaggagacaagggtgaaagaggagcccccggaatcacagga
cccaagggagacgtgggagcaagaggcgtttctggattccctggtgccgatggaattcct
ggacacccggggcaaggtgggcccaggggaaggcccggctacgatggctgcaacggaacc
cagggagactcaggtccacagggtccccccggctcggaggggttcaccgggcctcccggg
ccccaaggaccaaaagggcagaaaggtgagccttacgcactgcctaaagaggagcgcgac
agatatcggggtgaacctggagagcctggattggttggtttccagggacctcccggccgc
cctgggcctgtgggacagatgggtccagttggagctccagggagaccaggaccacctgga
ccccctggaccaaaaggacagcaaggaaacagaggacttggtttctacggagtgaagggt
gaaaagggtgacgtagggcagccaggacccaacgggattccaccagaaacccaccccgtc
atcgcgcccacgagagtcacccaccacccagaacaggacaagggtgaaaaaggcagcgag
ggcgaaccgggaataaaaggcatttccttgaagggagaagaaggaatcatgggctttcct
ggaccaaggggttaccctggcttgagtggtgaaaaaggatcgccgggacagaagggaagc
cgaggcctggatggttatcaaggctctgatgggccccggggccccaagggagaaaccgga
gacccaggaccccctggactacctgcctactcccctcacccttccctagcaaaaggtgcc
agaggtgacccaggattcccaggggcccgaggggagccaggaagccagggtgagccagga
gacccaggcccccgaggcccacctggcatctccatcacagctgaagatctggggagaggc
ctgccgggtgagatgggacccaaaggcttcatcggagaccccggcatcccggctctctac
ccgggcccacccggacttgacggaaagccggggcttccaggaccccccgggctccctgga
ccgcctgggcctgatggcttcctgtttggcctgaaaggagcagaaggaagagggggcttc
cctgggctttctggctcccctggagcccgtggacagaagggacggaaaggtgatgctgga
gactgcagatgtgtagaaggcgacgaagctgtcagaggtcttccgggactgccaggaccc
aagggcttcccaggcatcaacggggagccagggaggaaaggggacagaggagaccccggc
caacacggccttcctgggttctcagggctcaagggagtccctggcaatcttggtgctccc
ggacccaagggagcaaaaggagattccagaacaatcacaacgaaaggtgagcggggacag
cccggcgtcccaggtgtccccgggatgaaaggtgacgacggcatcccaggccgcgagggg
ctcgatggattccccggcctcccgggccctcccggcgatggcatcaaaggccctccaggg
gacccgggctatccaggaatacctggaacaaagggttctccaggagaaatgggtccccca
ggactgggccttcccggcttcaaaggccaacgtggtttccctggagacgccggcttacct
ggaccacgcggcttcccaggccctcccggccctccagggaccccaggacaggcagattgt
gacccagatgtgagaaggcccattgcaggtgacagacaggaggccgtccagccaggttgc
gcaggagggcccaagggattgccaggcctgccaggacccccaggccccacaggtgccaaa
ggcctccgaggaaccccaggcttctcaggagctgatggaggagcaggacccaaaggcttg
ccaggagacccaggtcgtgaagggttcccaggacccccagggttcataggaccccgagga
tccaaaggtgcagcgggtctccctggcccagatggactcccaggtcccgtcggcctgcca
ggtccagtcgggccccccggggacaagggccttcctggagaagtcctgggagcccaacct
ggaccacggggagatgctggcgtgcctggacaccctgggctgaaaggccttcctggagac
agaggcacccctggattcagaggaagccaagggatgcctgggatgcccgggctgaagggc
cagctgggcttcccgggaccgtccggccagccaggcctgtccgggcctccaggacagcat
ggattcccaggagctcctggcccagaggggcctttgggactgccaggaaccctgggcctt
ggaggtctgcctggagatagaggggagcccggcgacgtgggtgctcccggccctgtgggc
atgaaaggtgtctctggtgacacaggagatgctggcttggcgggagagcgaggccgtcca
ggaagccctgggtttaaaggaattgatggaatgcctggggcccccgggctcaaaggagag
agaggctcgcctgggatggacggtttccagggcatgcctggactcaaagggagacccggg
attccggggagcaaaggcgaggcaggatttttcggaatacctggtctgaagggtctggct
ggtgaaccaggttttaaaggcagccgaggggatcctgggcccccaggaccacctcccatc
atcctgccaggaatgaaagacatcaagggggagaaaggagatgaagggcctatggggctg
aaaggatacctgggcgcgaaaggtacccaaggaatgccaggcatcccggggctgtcagga
atccctggactgcctgggcggcctggccacatcaaaggactcaagggagacattggagcc
cccggcatccctggtttgccaggattccctggggtggccggcccccctggaattacagga
ttcccaggattcacaggaagccggggtgacaaaggtgccccggggagagcaggcctgtac
ggcgaggctggccagaccggtgatttcggtgatatcggggacactataaatttgccagga
agaccaggcctgaagggggagcggggcaccgctggaataccaggtctgaagggattcttt
ggagaaaagggaacagaaggtgacattggcttccctgggataacaggcgtgactggagtc
caaggtcctcccggacttaaaggacaagcaggctttccagggctgactgggccaccaggg
cctcagggagagcccgggcggattggactgcctggtggcaaaggggatgatggctggcca
ggagctccaggcttaccaggttttccaggaccccgtgggatcagcggcttacacggcttg
ccaggcaccaaaggcttcccgggatccccaggtgctgacatccacggagacccaggctac
tcaggtcctcctggggagagaggtgacccaggagaggccaacaccctgccaggccctgtg
ggagtcccaggacagaaaggagaacaaggagctccagggcaacgaggcccacccgggagt
ccaggacttcaggggttccccggcatcacgcccccttccaacatctctggggcacctggt
gacaaaggggcgccagggatatttggcctgaaaggttatcggggcccacccgggccaccg
ggatctgctgctcttcctggaagcaaaggtgacacagggaacccaggagctccaggaacc
ccagggaccaaaggatgggttggggaccccgggccccagggcaggcccggcgtgctcggt
ctcccaggagaaaaagggcccaggggtgaacaaggcttcatggggaaccctggactcccc
ggacctgtgggtgacagaggccccaagggacccaagggagacccaggattccccggtgcc
cccggcatcgtgggagcccccgggattgcaggaattccccagaagatcgctacccaacca
gggacagtgggtccccaggggaggcgaggccctcctggggcacccggggagatggggccc
cagggcccccccggagaaccaggtttccgtggggctccagggaaagccgggccccaggga
agaggtggcgtgtctgctgttcctggcttccggggagatgaagggcccacaggccaccag
gggccgattggccaagaaggtgtgccaggccgtccagggagcccgggcctgcccggcatg
ccaggccgcagtgtgagcatcggctacctcttagtgaagcacagccagacggaccaggag
cccatgtgccctgtgggcatgaacaagctctggagcgggtacagcctgctgtactttgag
ggccaggagaaagcacacaaccaggacctggggctagcgggctcctgcctggcacggttc
agcaccatgccctttctctactgcaaccctggggacgtctgctactatgccagccggaac
gacaagtcttactggctctccaccaccgccccgctgcccatgatgcccgtggccgaagac
gagatcaagccttacatcagccgctgctctgtgtgtgaggccccagccgtcgccattgct
gtccacagccaagatgtctccatcccccactgcccagctgggtggcggagtttgtggatc
ggatattccttcctcatgcacacggcagcgggagacgaaggcggtggccagtcactggtg
tcaccaggcagttgtctggaggacttccgcgccacgccattcatcgagtgcaatggaggc
cgcggcacctgccactactacgccaacaagtacagcttctggctgaccaccatccccgag
cagagcttccagggctcgccctcggctgacacactcaaggctggcctcatccgcacacac
atcagccgctgccaggtgtgcatgaagaacctgtga

DBGET integrated database retrieval system