Callithrix jacchus (white-tufted-ear marmoset): 100406316
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Entry
100406316 CDS
T03264
Symbol
TAP2
Name
(RefSeq) antigen peptide transporter 2 isoform X1
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc02010
ABC transporters
cjc04145
Phagosome
cjc04612
Antigen processing and presentation
cjc05163
Human cytomegalovirus infection
cjc05168
Herpes simplex virus 1 infection
cjc05169
Epstein-Barr virus infection
cjc05170
Human immunodeficiency virus 1 infection
cjc05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100406316 (TAP2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100406316 (TAP2)
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
100406316 (TAP2)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100406316 (TAP2)
05168 Herpes simplex virus 1 infection
100406316 (TAP2)
05163 Human cytomegalovirus infection
100406316 (TAP2)
05169 Epstein-Barr virus infection
100406316 (TAP2)
09163 Immune disease
05340 Primary immunodeficiency
100406316 (TAP2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cjc02000
]
100406316 (TAP2)
Enzymes [BR:
cjc01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
100406316 (TAP2)
Transporters [BR:
cjc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
100406316 (TAP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_30
SMC_N
AAA_22
AAA_21
AAA_29
AAA_25
AAA_23
AAA_16
AAA_15
SAM_3
AAA_33
SRP54
APS_kinase
AAA_5
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
100406316
NCBI-ProteinID:
XP_054109825
Ensembl:
ENSCJAG00000021550
LinkDB
All DBs
Position
4:complement(37187765..37198624)
Genome browser
AA seq
759 aa
AA seq
DB search
MKASAGEAKAKAARAQTPAQAERGCWTRAVSEVGRDGEDLRAKAEAPELQSPRRGWVMPL
PDLRPWTSLLLVDAALLWLLQGPLGTLLPQGLPGLWLEGTVRLGGLWGLLKLTGLLGFVG
TLLPPLCLATPLTVSLRALVAGASSVPPARVASAAWSWLLVGYGAAGLSWSLWAVLSPPG
AQETEAQDKNKVLMWRLLKLSRPDLPFVIAAIFFLALAVLGETLIPHYTGRVIDILGGDF
DPHAFASAIFFMCLFSFVSSLSAGCRGGCFTYTMSRINLRIREQLFSSLLRQDLGFFQET
KTGELNSRLSSDTTLMSNWLPFNANVLLRSLVKVVGLYGFMLSISPRLTFLSLLDMPFII
AAEKVYNARHQAVLREIQDAVARAGQMVREAVGGLQTVRSFGAEEHEVCRYKEALEQWRQ
LCWRRDQEQALYLLLKRVLHLGVQVLMLSCGLQQMLAGELTQGSLLSFMINQESVRSDVH
TLVFICGDMLSKVGAAEKVFSYLDRQPNLPSPGTLAPTTLQGVVKFQDVSFAYPSRPDRP
VLKGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTRGQVLLDGKPISQYEHCYLHS
QVVSVGQEPVLFSGSVKSNITYGLQSCEDDKVMAAARAAHADDFIQEMKHGIYTDVGEKG
SQLAVGQKQRLAIARALVRDPRVLILDEATSALDVQCEQVLQDWNSRGDRTVLVIAHRLQ
TVQSAHQILVLQEGKLQELTQLQEGQDLYSHLVQQWLMD
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcctccgctggggaagcgaaagcgaaagctgcccgagcccagacgcccgcccag
gctgagcgcggctgctggaccagagcagttagcgaagttgggagagacggagaggacctc
cgcgctaaagcagaagccccggagctgcagtctccccgccgcggctgggtcatgccgctc
cctgacctgagaccctggacctctctgctgctggtggacgcggctttactgtggctgttg
cagggccctctggggactttgcttcctcaagggctgccaggactatggctggaggggacc
gtgaggctgggagggctgtgggggctgctaaagctaacagggctactgggatttgtgggg
accctgctgcccccactctgcctggccactcccctgactgtctccctgagagccctggtc
gcgggggcctcaagtgttcccccagcgagagtcgcttcagccgcttggagctggctgctg
gtggggtatggggccgcggggctcagctggtcactgtgggctgtgctgagccctcctgga
gcccaggagacggaggcccaggacaagaacaaagtcttgatgtggaggctgctgaagctc
tccaggccggacctgcctttcgtcattgccgctatcttcttccttgcccttgctgtcttg
ggtgagacattaatccctcactatactggtcgtgtgattgacatccttggaggcgatttt
gacccccatgcctttgccagtgccatcttcttcatgtgcctcttctcctttgtcagctca
ctgtctgcaggctgcagaggaggctgcttcacgtacaccatgtctagaatcaacttgcgg
atccgggagcagcttttctcctccctgctgcgccaggaccttggtttctttcaggagact
aagacaggggagctgaactcacggctgagctcggataccaccctgatgagtaactggctt
ccttttaatgccaatgtgctcttgcgaagcttggtgaaagtggtggggctgtatggcttc
atgctcagcatatcgcctcgactcaccttcctttccctgctggacatgcccttcataata
gcagctgaaaaggtgtacaacgcccgccatcaggcagtgcttcgggagatccaggatgca
gtggccagggcggggcagatggtgcgggaggctgttggagggctgcagactgttcgcagt
tttggtgctgaggagcatgaggtctgtcgctataaagaggcccttgaacaatggcggcag
ctgtgctggcggagagaccaggaacaagccttgtacctgctcttaaagagggtgctgcac
ttgggggtgcaggtgctgatgctcagctgtgggctgcagcagatgctggctggggagctc
acccagggcagcctgctttcctttatgatcaaccaggagagcgtgcggagcgatgtgcat
accctggtattcatttgtggggatatgctcagcaaagtgggtgctgcagagaaggttttc
tcctacctggaccgacagccaaacctgccctcacctggcacactggcccccaccactctg
cagggggttgtgaagttccaagatgtctcctttgcatatcccagtcgccctgacaggcct
gtgcttaaggggctgacgttcaccctacgtcctggcgaggtgacagcgctggtgggaccc
aatgggtctgggaagagtacagtggctgccctactgcagaatctgtaccagcccacacgg
ggacaggtgctgctggatggaaagcccatctcgcaatatgaacactgctatctgcacagc
caggtggtttcagttgggcaggagcctgtgctgttctcaggttctgtgaagagcaacatt
acttacgggctgcagagctgcgaagatgataaggtgatggcagctgcccgggctgcccac
gcagatgacttcatacaggaaatgaagcatggaatatacacagatgtaggggagaaggga
agccagctggctgtgggacagaaacaacgtctggccattgcccgggccctcgtgcgagac
ccacgggtcctcatcctggatgaggccaccagtgccctggatgtgcagtgcgagcaggtg
ctgcaggactggaattcccgtggggaccgcacggtgctggtgattgctcacaggctgcag
acagttcagagcgcccaccagatcttggtgctccaggagggcaagctgcaggagcttacc
cagctccaggaggggcaggacctctattcccacctggtacagcagtggctgatggactga
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