Callithrix jacchus (white-tufted-ear marmoset): 100407986
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Entry
100407986 CDS
T03264
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04140
Autophagy - animal
cjc04211
Longevity regulating pathway
cjc05010
Alzheimer disease
cjc05014
Amyotrophic lateral sclerosis
cjc05016
Huntington disease
cjc05017
Spinocerebellar ataxia
cjc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100407986 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
100407986 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100407986 (RB1CC1)
05014 Amyotrophic lateral sclerosis
100407986 (RB1CC1)
05016 Huntington disease
100407986 (RB1CC1)
05017 Spinocerebellar ataxia
100407986 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
100407986 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cjc01009
]
100407986 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100407986 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
cjc03029
]
100407986 (RB1CC1)
Protein phosphatases and associated proteins [BR:
cjc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100407986 (RB1CC1)
Membrane trafficking [BR:
cjc04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100407986 (RB1CC1)
Mitochondrial biogenesis [BR:
cjc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100407986 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Jag_N
Motif
Other DBs
NCBI-GeneID:
100407986
NCBI-ProteinID:
XP_002807668
Ensembl:
ENSCJAG00000014530
LinkDB
All DBs
Position
16:1839569..1941624
Genome browser
AA seq
1594 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILCDRPPAIPKSTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRRDSLPEHEASEEAEMKRSTQL
VLSPDTPGTTSQSLLTSFPKSVAHVSPDTTDAEHGKEIRESGQSTVHQQDETSIDTKDGD
LPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMK
AIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQL
MIMLQNHRKLLDIKQKCSTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELL
ERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGK
LFRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVP
LLCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASVSQTSPQSASSPRIESTT
GITTTTSPRTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLD
LDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDT
NVCGAEDFGDHASLNVRMERCRVVAQDSHCSIQTMKEDLCRFRTFVQKEQCDFSNSLKCT
AVEIRNIIENLKCSLEITLKEKHQKELQSLKNEYEGKLDALIKETEENESKIKKLKGDLV
RLEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHSQNCEIKELKQSREVVLE
DLKKLHVENDEKLQLLRAELQSLEQSHLKELEDTLQVRHIQEFEKVMTDHRVSLEELKKE
NQQIINQIQESHATIIQEKEQQLQELKLKVSDLSDTRCKLEVELALKEAETDEIKILLEE
SRAQQQETLKSLLEQETENLRTEISKLNQKLQDNNENYQVGLAELRTLMTIEKDQCISEL
ISRHEEESNILRAELNKVTSLHHQAFEIEKNLKEQIIELQSKLDSELSALEKQKDEKISQ
QEEKYEAIIQNLEKDKQKLVMSQEQDREQLIQKLNCEKDEAIQTALKEFKLEREVVEKEL
LEKVRHLENQIAKSPAIDSTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNV
RTSLIAEQQTNFNTVLTREKMRKENIINDLSDRLKSTMQQQERDKDLIESLSEDRARLLE
EKKKLEEEVSKLRSSSFAPSPYAAAAPELYGACAPELPADSDRSALETAEEGRVDSAMET
SMMSVEENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRD
FQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGTSRRPWVLGKVM
EKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtgtttctggttaacactggaactactctaacatttgacactgaactt
acagtgcaaactgtggcagaccttaagcatgccattcaaagcaaatacaagattgctatt
caacaccaggtgctggtggtcaatggaggagaatgcatggctgcagatcgaagagtgtgc
acctacagtgctgggacggatacaaatccaatttttctttttaacaaagaaatgatctta
tgtgaccgtccacctgctatccctaaaagtaccttttcgacagaaaatgacatggaaata
aaagttgaagaatctcttatgatgcctgcggtttttcacactgttgcttcaaggacacag
cttgccgtggaaatgtatgaagttgccaagaaactctgttctttctgcgaaggtctcgta
catgatgagcatcttcaacaccaaggctgggctgcaatcatggccaacctggaggactgt
tcgaattcataccaaaagctacttttcaagtttgaaagtatttattcaaattatctgcag
tccatagaagacatcaagttaaaacttactcatttaggaactgcagtttcagtaatggcc
aagattccactgctggagtgcctaaccagacatagttacagagaatgtttgggaagacgg
gactctttacctgagcatgaagcctcagaagaagctgagatgaaaagatccactcaactg
gtgctctctcctgatacgcctggaacaactagccagtccttgttaacctcatttcccaag
tcagtggcacatgtgtccccagacaccacagatgctgaacatggcaaagaaattagggaa
tctggtcaaagtactgttcatcagcaagatgaaacttccatagatactaaagatggtgat
ctgcccttttttaatgtttctttgttagactggataaatgttcaagatagacctaatgat
gtggaatctttggtcaggaagtgctttgactctatgagcaggcttgatccaaggattatt
cgaccgtttatagcagaatgccgtcagaccattgccaaacttgataatcagaatatgaag
gccattaaggggctggaggaccggctctacgccctggaccagatgatcgccagctgcagc
cgactggtgaatgagcagaaagagctcgctcagggatttttagctaatcagatgagagct
gaaaacttaaaggacgcatccgtattacctgatttatgcctgagtcacgcaaatcagttg
atgattatgttgcaaaatcatagaaaactgttagatattaagcagaagtgttccactgcc
aaacaagaactagcaaataacctacatgtcagactgaaatggtgttgctttgtaatgctt
catgccgatcaagatggagagaagttacaagctttgctccgcctcgtaatagagctgtta
gaaagagtaaaaattgtcgaagctcttagtacagttcctcagatgtactgcttagctgtt
gttgaggttgtaagaagaaaaatgtttataaaacactacagggagtgggctggtgcttta
gtcaaagacggaaagagattatatgaagcagaaaaatcaaaaagggaatcctttgggaaa
ttatttaggaagtcttttttaagaaatcgtctgtttaggggactggactcctggccccct
tcattttgtacccagaagcctcgaaagttcgactgtgaacttccagatatctcattaaaa
gatttacagtttcttcaatcattttgtccttcagaagttcagccattcctcagggttccc
ttactttgtgactttgaacctctacaccagcatgtacttgctctacataatttggtaaaa
gcagcacaaagtttggatgaaatgtcacagaccattacagatctactgagtgaacaaaag
gcttccgtgagtcagacatccccacagtctgcttcttcaccaaggatagaaagtacgaca
ggaattacaactactacctcaccaagaactcctccaccactgactgttcaggatccctta
tgtcctgcagtttgtcccttagaagaattatctccagatagcattgatgcacatacattt
gattttgaaactattccccatccaaacatagaacaaactattcaccaagtttctttagac
ttggattcattagcagaaagtcctgaatcagattttatgtctgccgtaaatgagtttgta
atagaagaaaatctgtcatctcctaatcctataagtgacccacaaagcccagaaatgatg
gtggaatcactttattcatcggttatcaatgcgatagacagtagacggatgcaggacaca
aatgtatgtggtgcagaggattttggagatcatgcttctctgaatgtccggatggaaaga
tgtagagttgttgcccaagactctcactgcagtatacaaaccatgaaggaagacctttgc
cgctttagaacatttgtacaaaaagaacagtgtgacttctcaaattcgttaaaatgtaca
gcagtagaaataagaaacattattgaaaacctaaaatgttctctggaaataacactaaaa
gaaaaacatcaaaaagaactacagtctttaaaaaatgaatatgaaggtaaacttgatgca
ctaataaaggaaactgaagagaatgaaagcaaaattaaaaaattaaagggagacttagtg
cgcctggaggaggttttacaaaataaagataatgaatttgctttggttaaacatgaaaaa
gaagctgtaatctgcctgcagaatgaaaaggatcagaagttgttagagatggaaaatata
atgcactctcaaaattgtgaaattaaagaactgaagcagtcacgagaagtagtgttagaa
gacttaaaaaagctccatgttgaaaatgatgagaaattacaattattgagggcagaactt
cagtccttagagcaaagtcatctaaaggaattggaggacacacttcaggtcaggcacata
caagagtttgagaaggttatgacagaccacagagtttctctggaggaattaaaaaaggaa
aaccaacaaataattaatcagatacaagaatctcatgctacaattatccaggaaaaagaa
caacagctgcaggaattaaagctcaaggtttctgatttgtcagacacgagatgcaagtta
gaggttgaacttgcattgaaagaagcagaaactgatgaaataaaaattttactggaagaa
agcagagcccagcagcaggagaccttgaaatctcttctggaacaagagacagaaaatttg
agaacagaaattagtaaactcaaccaaaagcttcaggataataatgaaaattatcaggtg
ggcttagcagagctaagaactttaatgacaattgaaaaagatcagtgtatttcagagtta
attagtagacatgaagaagaatcaaatatactcagagctgaattaaacaaagtaacatct
ttgcatcaccaagcatttgaaatagaaaaaaacctaaaagaacaaataattgaactgcag
agtaaattagattcagaattgagtgcccttgaaaaacaaaaagatgaaaaaatctcccaa
caagaagagaaatatgaagctattatccagaacctggagaaggacaaacaaaagttggtc
atgagccaggaacaagacagagaacagttaattcagaagctgaattgtgaaaaagacgaa
gctattcagactgccctaaaagaatttaaattggagagagaagttgttgagaaggagtta
ttagaaaaagttagacatcttgagaatcaaatagcaaaaagccctgccattgattctacc
agagaagattcttcaagcctagttgctgaacttcaagaaaagcttcaggaagaaaaagct
aagtttctagaacaacttgaagagcaagaaaaaagaaagaatgaggaaatgcaaaatgtt
cgaacatctttgattgcggaacaacagaccaattttaacactgttttaacaagagagaaa
atgagaaaagaaaacataataaatgatcttagtgatagattgaaaagtacaatgcagcag
caagaacgggataaagatttgatagagtcactttctgaagatcgagctcgtttgcttgaa
gagaagaaaaagcttgaagaagaagtcagcaagttgcgtagcagcagttttgctccttca
ccgtatgcagctgcagccccggagctttatggagcttgtgcacctgagctcccagctgac
tcggatagatctgctctggaaacggccgaggaaggaagagtggattcagcaatggagacc
agcatgatgtctgtagaagaaaatattcatatgttgtctgaagaaaaacagcggataatg
ctgttagaacgaacattgcagctgaaggaagaagaaaataaacggttaaatcaaagactg
atgtctcagagcatgtcttcagtatcctcaaggcattctgaaaagatagctattagagat
tttcaggtgggagatttggtactcatcatcctagacgaacgccatgacaattatgtgtta
tttactgttagtcctactttatattttctacattcagagtctctgcctgccctggatctc
aaaccaggtgagggtgcttcaggtacatctagaagaccctgggtacttggaaaagtaatg
gaaaaggaatactgtcaagccaaaaaggcacaaaacagatttaaagttcctttggggaca
aagttttatagagtgaaagctgtatcgtggaataagaaagtataa
DBGET
integrated database retrieval system
