Callithrix jacchus (white-tufted-ear marmoset): 100412430
Help
Entry
100412430 CDS
T03264
Symbol
GSDMD
Name
(RefSeq) gasdermin-D
KO
K20917
gasdermin-D
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04613
Neutrophil extracellular trap formation
cjc04621
NOD-like receptor signaling pathway
cjc04623
Cytosolic DNA-sensing pathway
cjc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100412430 (GSDMD)
04621 NOD-like receptor signaling pathway
100412430 (GSDMD)
04623 Cytosolic DNA-sensing pathway
100412430 (GSDMD)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100412430 (GSDMD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cjc02000
]
100412430 (GSDMD)
Transporters [BR:
cjc02000
]
Other transporters
Pores ion channels [TC:
1
]
100412430 (GSDMD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Motif
Other DBs
NCBI-GeneID:
100412430
NCBI-ProteinID:
XP_002759231
Ensembl:
ENSCJAG00000021434
LinkDB
All DBs
Position
16:complement(52357533..52362136)
Genome browser
AA seq
481 aa
AA seq
DB search
MGSAFEWVARRVVQELDHGGDLIPVTSLQSSTGFKPYCLVVRKPSGSWFWKPRYKHISLS
IKDILEPDAPEPVLQHGGPFHIHDTVDGQLRTSVEVAVPGQGKVAGGASVSDSSSTSLNV
FSLSVGPNTWQALLQERHLRQPEHRILQQLRCRGDNVYVVTEVLQTQKEVEVTRTYRREG
SGLVSLAGAMCLQGEGEGHLSQKKTVTIPSGSILAFRVALLVIQSDLEVILFPDKKQKTF
QPPPTGYRPFSSKGSWWMDLSMKGCIGNFWTDGVPVNGTVTEDFQGLRAEVEVVSKELAL
MDGQLCRLLLEGLERGLRDQLALQALEEALEQGLSSGPVEPLDGPAGAVLDCLVLPSRML
VLELAVPVVYLLGALNTLSKAQHQLLVEAVELKTLSRQLELVGSLLEKSAPWQKCSTLSL
PPELLKSGWGVETPAWVLLEECGLELREDPPHVHWEPQAQDCVCALYASLALLSELSQEP
Q
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggggtcggcctttgagtgggtggctcggagagtagtccaggagctggaccatggtggg
gacctcatccctgtgaccagcctgcagagctccactggcttcaagccctactgcctggtg
gtcaggaagccctcaggctcatggttctggaaaccccgctataagcatatcagcctgtca
atcaaggacatcctggagcccgatgccccggaaccagttttgcagcatggcggtcccttc
cacatccatgacaccgtggacgggcagctacggactagcgtggaggtggcagtcccagga
caggggaaggtcgcaggcggggcctcggtgtctgacagctccagcacctcgctgaatgtg
ttctcgctgagcgtgggcccaaacacctggcaggccctgctccaagagaggcacctgcgg
cagccagagcacagaatcctgcagcagctccggtgccgaggggacaacgtgtacgtggtg
acggaggtgctgcagacacagaaggaggtggaagtcacgaggacctaccggcgggagggt
tcgggccttgtttccctggccggagccatgtgcttgcagggtgagggcgagggccacctg
agccagaagaagacggtcaccattccttcgggcagcatcctcgcattccgggtagccctg
ctggttattcagtctgacttggaagtcattctcttcccggataagaagcagaagaccttc
cagccgcccccgacaggctacaggcctttcagcagcaaaggttcctggtggatggacctc
tccatgaaggggtgcatcggcaacttttggacagatggggtccctgtgaatgggacggtt
actgaagacttccagggccttcgggcagaggtggaagttgtctccaaggaactggcgctc
atggatgggcagctgtgccggctgctgctggagggcctggagcgggggctgcgggaccag
ctggccctacaagccttggaggaggcgctggagcagggcctgagctccgggccggtagag
cccctggatggtccggcaggtgcagtgttggattgcctggtgctcccctccagaatgctg
gtgctggaacttgccgtccctgttgtctacctgctgggggcactgaacacgctgagtaaa
gcccagcaccagctgctggtggaggccgtggagttaaagaccctgtcgaggcagctagag
ctggtgggcagcctcttggagaagagtgccccgtggcagaagtgcagcaccctgtccctg
ccccccgagctcctgaagagcggctggggtgtagagacaccagcctgggtcttgctggag
gagtgtggcctggagctgagggaggaccctccccacgtgcactgggagccacaggcccag
gactgcgtgtgtgcactctacgcctccctcgcactgctgtcagaactgagccaggagccc
cagtag
DBGET
integrated database retrieval system
