Callithrix jacchus (white-tufted-ear marmoset): 100414962
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Entry
100414962 CDS
T03264
Symbol
NOD2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2 isoform X1
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04621
NOD-like receptor signaling pathway
cjc04668
TNF signaling pathway
cjc05152
Tuberculosis
cjc05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
100414962 (NOD2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100414962 (NOD2)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
100414962 (NOD2)
09163 Immune disease
05321 Inflammatory bowel disease
100414962 (NOD2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cjc04054
]
100414962 (NOD2)
Pattern recognition receptors [BR:
cjc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100414962 (NOD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
LRR_6
NLRC4_HD2
NOD2_WH
LRR_4
LRR_8
AAA_16
AAA_29
AAA_22
AAA_25
NB-ARC
AAA_30
ABC_tran
nSTAND3
Motif
Other DBs
NCBI-GeneID:
100414962
NCBI-ProteinID:
XP_035137617
LinkDB
All DBs
Position
20:5280945..5321512
Genome browser
AA seq
985 aa
AA seq
DB search
MCSQEAFQAQRSQLVELLVSGSLEGFESVLDWLLSWEVLSWEDYEGFHILGQPLSHLARR
LLDTVWNKGTWACQKLITAVQEVQADSRTPKLHGCWHPYSLHPAQDLQSHRPAIVRRLHS
HVEGVLDLACERGFVSQYECDEIRLPIFTPSQRARRLLDLATVKANGLAAFLLQHVQELP
VPLALPLEAATCKKYMAKLRSTVSAQSRFLSTYDGAETLCLEDIYTENVLEVWADVGVAG
LPQKSPATLGLEELFSTPGHLSDDADTVLVVGEAGSGKSTLLQRLHLLWAAGRDFQEFLF
VFPFSCRQLQCVVKPLSVQMLLFEHCCWPDVDQQDIFQFLLDHPDRVLLTFDGFDEFKFR
FSDRERHCSPTDPTSVQTLLFNLLQGNLLKNARKVVTSRPAAVSAFLRKYIRTEFILKGF
SEEGIELYLRKRHREPGVADRLIRLLQATSALHGLCHLPVFSWMVSKCHQELLLQEGGSP
KTTTDMYLLILQHFLLHAIPPDSACHILGPSLLLGCLPTLLRLGRLALWGLGMCCYVFSA
QQLQAAQVSPDDISLGFLVRAKGVMPESTAPLEFLHITFQCFFAAFYLALSADVPPALLR
HLFNCGRPGNSPMARLLPMLCIQGSRGKDGSVAALLQKTEPHNLQITAAFLAGLLSWEHW
GLLAECQASKKALLQRQACARWCLARSLRKHFHSIPPAAPGEAKSMHAMPRFIWLLRSLY
EMQDERLARKAVRGLNVGHLKLTFCSVGPTECAALAFVLRHLQRPVALQLDYNSVGDIGV
EQLLPCLGVCKALYLRDNNISDRGVCKLIEHALHCEPLQKLALGNNHITAAGAQVLAEGL
RSNTSLQFLGFWGNRVGDEGAQALAEALSDHQSLRWLSLVGNNIGSVGAQGLALMLAKNV
MLEELCLEENHLQDEGVCSLAEGLKRNSSLKILKLSKNCITYLGAEALLQALERNDTILE
VWLRGNTFSLEEVDKLSCRDTRLLL
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcgcaggaggcttttcaggcacagaggagccagctggtggagcttttggtctcg
ggatccctggagggcttcgagagcgtcctggactggctgctctcctgggaagtcctctcc
tgggaagactacgagggcttccacatcctgggccagcctctctcccacttggccaggcgc
ctcctggatactgtctggaataagggtacttgggcctgtcagaaactcatcacagctgtc
caggaagtgcaggctgacagccggacccccaagctgcatggctgctggcacccctactca
ctccacccagcccaagacctgcagagtcaccggccagccattgtcaggaggctccacagc
catgtggagggcgtgctggacctggcatgtgagcggggtttcgtcagccagtatgaatgt
gatgaaatcaggctgccgatcttcacaccgtcccagagggccagaaggctgctcgatctt
gccacagtgaaggcgaatggattggctgccttccttctacagcatgttcaagaattacca
gtcccgttggccctacctttggaagctgccacatgcaagaagtacatggccaagctgagg
tccacagtgtctgctcagtcccgcttcctcagtacctatgacggggcagagacgctctgc
ctggaggacatatacacagagaatgtcctggaggtctgggcggatgtgggcgtggctgga
ctcccgcagaagagcccggccactctggggctggaggagctcttcagcacccctggccac
ctcagtgacgatgcagacactgtgctggtagtgggcgaggcgggcagcggcaagagcacg
ctcctgcagcggctgcacttgctgtgggctgctgggcgagacttccaggaatttctcttt
gtcttcccattcagctgccggcagctgcagtgcgtggtcaaaccactctctgtgcagatg
ctactctttgagcactgctgttggcccgacgttgatcaacaggacatctttcagtttctc
cttgaccaccctgaccgtgtcctgctaacctttgatggctttgacgagttcaagttcagg
ttctcggatcgcgagcgtcactgctccccgacggaccccacctctgtccagaccctgctc
tttaaccttctgcagggcaacctgctgaagaatgcccgcaaggtggtgaccagccgtcct
gctgctgtgtcggcgttcctcaggaagtacatccgcaccgaattcatcctcaagggcttc
tccgaagagggcattgagctgtacttgaggaagcgccatcgtgagcctggagtggcggac
cgcctcatccgcctgctccaagcgacctcagccctgcatggtttgtgccaccttcccgtg
ttctcatggatggtgtccaaatgccaccaggaactgttgctgcaggaaggggggtccccg
aagaccactacagatatgtacctgctgatcctgcagcattttctgctgcatgccatcccc
ccagactcagcctgccacattctgggacccagtctccttctgggctgcctccccacactt
ctgcgcctcggcagacttgctctctggggcctgggcatgtgctgctatgtgttctcagcc
cagcagctccaggcagcacaggtcagtcctgatgacatttctctcggcttcctggtgcgt
gccaaaggtgtcatgccagagagtacagcgcctctggaattcctgcacatcactttccag
tgcttctttgctgcgttctacctggcactcagtgctgatgtgccgccagccttgctcaga
cacctcttcaattgtggcaggccaggcaactcaccaatggccaggctcctgcccatgttg
tgcatccagggctcgcgggggaaggatggcagcgtggcagctttgctgcagaagactgag
ccgcacaaccttcagatcacggcagccttcctggcggggctgttgtcctgggagcactgg
ggcctgctggccgagtgccaggcatccaagaaggccctgctccagcgccaggcctgtgcc
cgctggtgtctggcccgcagcctccgcaagcacttccactccatcccgccagccgcgcca
ggtgaggccaagagcatgcacgccatgcccaggttcatctggctcctccggagcctatat
gagatgcaggatgagcggctggcacggaaggctgtacgtggcctgaatgtcgggcacctc
aagttgacattttgcagcgtgggccccactgagtgtgctgctctggccttcgtgctgcgg
cacctccagcggcccgtggccctgcagctggactacaactctgtgggtgacattggcgtg
gagcagctgctgccttgccttggtgtctgcaaggctctgtatttgcgtgataacaatatc
tcagaccgaggcgtctgcaagctcattgaacatgctcttcactgcgagccattgcagaag
ttagcgctggggaataaccacatcaccgccgcgggagcccaagtgctggctgaggggctg
cgaagcaacacctccttgcagttcctggggttctggggcaacagagtgggtgatgagggg
gcccaggccctggctgaagccttgagtgatcaccagagcttgaggtggctcagcctggtg
gggaacaacattggcagtgtgggtgctcaaggcttagcactgatgctggcaaagaacgtc
atgctagaagaactctgcctggaggagaaccatctccaggatgaaggtgtatgttctctc
gcagaaggactgaaaagaaattcaagtttgaaaatcctgaagttgtccaaaaactgcatc
acctacctaggggcagaagccctcctgcaggcccttgaaaggaatgacaccatcttggaa
gtctggctccgagggaacactttctctctagaggaggttgacaagctcagctgcagggac
accagactcttgctttga
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integrated database retrieval system
