Coturnix japonica (Japanese quail): 107307085
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Entry
107307085 CDS
T04297
Symbol
DDX23
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX23
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
3.6.4.13
]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107307085 (DDX23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjo03041
]
107307085 (DDX23)
Enzymes [BR:
cjo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
107307085 (DDX23)
Spliceosome [BR:
cjo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107307085 (DDX23)
Complex C
U5 SnRNP specific factors
107307085 (DDX23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
AAA_19
DUF3698
Motif
Other DBs
NCBI-GeneID:
107307085
NCBI-ProteinID:
XP_032297564
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MAGELADKKERDSSPGKEERKRSRSPERDRDRDRDRKGSPKDRKRHRSRDRRRSSRSRSR
SRSKSLDRDRRHKERDRDRGKKDRDREKEKDGGHRRDKERKRGRACSPIRGKDSKSRKER
EQRKGEEEEEKRXKRRRRSPSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQEVE
ERQRLLGGRREEEEQFQELGEEDTQERERRERRERMERESNGTEDEEGRQKIREEKDKSK
ELHAIKERYXGGVKKRRRTRHLNDRKFVFEWDASXGTSIDYNPLYKERHQVQLLGRGFIA
GIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKKLDEM
TDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIG
LQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIE
EETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTY
VVLDEADRMIDMGFEPDVQKILEHMPVTNQKPDTDEAEDPEKMLANFESGKHKYRQVGYG
VWGMGCGPDYIHRIGRTGRAGKSGVAITFLTKEDSSVFYELKQAILDSPVSSCPPELANH
PDAQHKPGTILTKKRREETIFA
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggagctggcggataagaaagaacgggactcgtcccccgggaaggaggaacgg
aaacgatcccggtcaccggaacgagaccgagaccgggaccgggaccggaagggatccccc
aaggaccggaaacggcaccgatcccgggacaggaggaggagcagccggtcacggtcacgg
tcacggtccaagtcgttggacagggaccggaggcacaaagagcgggaccgggaccggggg
aagaaggaccgagaccgggagaaggagaaagatggcggccaccggagggacaaggagcgg
aaacggggcagggcctgttccccgatcaggggtaaagactccaaatcccgcaaggagaga
gagcagaggaagggggaggaggaggaggagaagcgctgaaaaaggagaaggcgcagcccg
tccctggaggagctgctggccaagaagaaggcggaggaggaggcagaagccaagcccaag
ttcctgtccaaggctgagcgtgaggccgaggccttaaagcggagacagcaggaggtggag
gagcgacagcggctgctgggagggaggagagaagaagaggagcaattccaggagcttggg
gaggaagatacccaggaacgggagcgcagggaaaggagggagaggatggagagagaaagt
aacggcaccgaggatgaggaggggaggcagaagatccgcgaggagaaggacaagagcaaa
gagctgcacgccatcaaggagcggtacntggggggggtgaagaagcgcaggaggacgcgg
cacctgaacgaccgcaagtttgtgtttgaatgggacgcttcctgaggaacctccattgac
tacaacccgctgtacaaggagaggcaccaggttcagctgttgggccgaggcttcatcgcg
gggatcgatttgaagcagcagaaaagggaacagtcgcgtttttatggggacctgatggag
aagaggaggacgctggaggagaaggagcaggaggaggccaggctgaggaaactgaggaag
aaagaagccaaacaacgttgggacgacagacattggtcccaaaagaaactggacgagatg
acggacagagactggaggatcttcagggaggattacagcatcaccaccaaggggggcaag
atcccaaaccccatccgctcctggaaggactcgtcactgccgccccatatcctggaggtc
atcgataagtgcggatataaggagcccacccccatccagcgtcaggccatccccatcggg
ctgcagaaccgcgacatcattggggtggctgagaccggcagcgggaaaacggccgcgttc
ctgatcccactgttggtgtggatcacaaccctgcccaaaatcgaccgcattgaggagtca
gaccaggggccctacgccatcatcctggcccccacccgtgaactggcccagcagatcgag
gaggaaaccatcaagtttgggaaaccgctggggatccgcacggtggccgttatcgggggc
atctcccgcgaggaccaagggttccgcctgcgcatgggctgcgagatcgtcattgccacc
cccgggcgcctcatcgacgtcctggagaaccggtacctggttctgagccgctgcacgtac
gtggtgctggacgaggcggatcggatgattgacatggggtttgagcctgatgtacagaag
atcctggagcacatgcctgtaaccaaccagaaaccggacacggacgaggccgaggatccg
gagaagatgctggcgaactttgagtccgggaaacacaagtacagacaggtgggatatggg
gtgtggggtatgggatgtgggccagattacatccaccgcatcggccgcacgggccgcgct
ggtaaaagcggcgtcgccatcacgttcctgaccaaggaggattcgtccgtgttctacgag
ctgaaacaagccatcctggacagccccgtgtcctcctgcccccccgagctggccaaccac
cccgatgcacagcacaaacccggcaccatcctcaccaagaagcgccgcgaggaaaccatc
ttcgcatga
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