KEGG   Coturnix japonica (Japanese quail): 107319020
Entry
107319020         CDS       T04297                                 
Symbol
CYLD
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
  KO
K08601  ubiquitin carboxyl-terminal hydrolase CYLD [EC:3.4.19.12]
Organism
cjo  Coturnix japonica (Japanese quail)
Pathway
cjo04217  Necroptosis
cjo04622  RIG-I-like receptor signaling pathway
cjo04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:cjo00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    107319020 (CYLD)
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    107319020 (CYLD)
   04625 C-type lectin receptor signaling pathway
    107319020 (CYLD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cjo01002]
    107319020 (CYLD)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cjo04121]
    107319020 (CYLD)
Enzymes [BR:cjo01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     107319020 (CYLD)
Peptidases and inhibitors [BR:cjo01002]
 Cysteine peptidases
  Family C67
   107319020 (CYLD)
Ubiquitin system [BR:cjo04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    107319020 (CYLD)
SSDB
Motif
Pfam: CYLD_phos_site CAP_GLY UCH COX_ARM
Other DBs
NCBI-GeneID: 107319020
NCBI-ProteinID: XP_015728989
UniProt: A0A8C2TUK5
LinkDB
Position
11:complement(5096799..5135229)
AA seq 954 aa
MSSGLWSQEKGSSSYWEERIFYLLLQECSVIDKQTQKLLKVPKGSIGQFFQDRSSMGHSR
NIPCKGKKLQIGLKILEQPHAVLFVDEKDVIEINEKLAELLLAITNCEERYSLFKSKSRL
TKGVQIDIGSPVRVQLRSGEEKFPGVVRFRGPLLQERSLTGIYFGVELLEEGRGQGFTDG
QYQGKQLFRCDEDCGVFVALDKLELVEEDDNELESDYAAPVDAMQVELPPLEINSRVSLK
IGESIEYGTVIFCDVLPGNESLGYVVGVDMDNPIGNWDGRYNGIQLCSFASVESTLLLHI
NDVIPETVSQDRRPPKLAYTARGSGDKSLFNHSKPKATGSTSEPGSRNRSEVFYTLNGSS
VDSQPQAKTKPPWYIDEVAEDPAKSLTDSSPGFGHSSPPLQPPLTNSVTTENRFHSLPFS
LTKASTTNGAIGHSPLSLSVQSVIGDVNTTPSQESPSTGGPVGNSHGLEAGSLAEVKENP
PFYGVIRWIGQPPGVNEVLAGLELEDECAGCTDGTFKGTRYFTCAPKKALFVKLKSCRPD
SRFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLETMIGKKKGIQGHYNSCY
LDSTLFCLFSFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKL
RKILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMDKN
EKVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELNITDLLE
DTPRQCRICGGLAMYECRECYEDTEISAGKIKQFCKTCNTQVHLHPRRQSHKFNPLSLPK
DLPDWDWRHGCIPYQKMELFAVLCIETSHYVAFVKYGRDDSAWLFFDSMADRDGGQNGFN
IPQVTPCPEVGEYLKMSVEELHSLDSRKIQGCARRLLCDAYMCMYQSPTMSLYK
NT seq 2865 nt   +upstreamnt  +downstreamnt
atgagttcagggttatggagtcaagaaaaaggaagttcatcctattgggaagagcgcatc
ttttacttgcttctccaagaatgcagcgtcatagacaagcagactcagaaactactgaag
gtgcccaagggcagcatcgggcagttttttcaagaccgctcttccatgggacactccaga
aatattccttgtaaaggcaagaaactacagattggattaaagattctggaacagccgcat
gcggttctttttgtggatgagaaggatgttattgaaatcaatgaaaagctggctgaactg
cttttggcaattactaactgtgaggaaaggtacagcttatttaaaagcaaaagcaggtta
actaaaggtgtccaaatagatattggctcacctgttagagtacagcttaggtcaggagaa
gagaagtttcctggagttgttcgtttcagaggacccttgttgcaggaaaggtccctaaca
gggatatattttggagtagaactgctggaagaaggtcgtggccagggctttactgatgga
cagtaccaaggcaagcagcttttcagatgtgatgaggattgtggggtttttgttgctttg
gacaaactggagctggtggaagaagatgacaatgaactggaaagtgactatgcagctcca
gttgacgcaatgcaggtagaacttcctcctctggagatcaactccagggtttctctgaag
ataggagagagtatagagtatgggacagttatattctgtgatgtcttaccaggaaacgaa
agtttaggatacgttgttggagtggacatggataatcccattggaaactgggatggaaga
tacaatggcatacagctgtgcagttttgcaagtgttgaaagtacccttcttttgcatatc
aatgatgttataccagagactgtgtcacaggacaggagacctcccaagcttgcctataca
gcaagaggcagtggcgataaaagtttgttcaaccatagtaagccaaaggcaacaggatct
acctctgagcctggaagtagaaacaggtctgaagttttctacacattgaatggctcatca
gttgattctcagcctcaagcaaaaacaaaacctccgtggtatattgatgaagttgctgaa
gaccctgcaaaatcacttactgattcatctcctggatttgggcattcttcaccaccactg
caaccacctttaacaaactctgtgactacagaaaacagattccactctctcccttttagt
ttgacaaaagcatcaactactaatggtgctattggacacagtcctctgtctttatctgtt
cagtcggtcattggtgatgtaaatactacacctagccaggaaagtccatcaacaggaggc
cctgttggtaactcacatggtcttgaagcaggttccttggctgaagtgaaagaaaatccg
ccgttctatggagtaatccgctggattggccagcctcctggggtaaatgaagtattggct
ggactggaactggaagatgaatgtgcaggttgtacagatggaacatttaaaggaacccga
tacttcacttgtgctccaaagaaagctctttttgttaaactgaagagctgcagaccggat
tccaggtttgcatcactacagccagtttccaatcagattgaacgctgcaactctctagcc
tttggaggttacttaagtgaagtggtagaagaaaacactcctccaaaaatggaaaaagaa
ggtttagagacaatgattggaaagaagaaaggtatccagggtcattacaactcctgttac
ttagactccaccttattctgcctgttttcttttagctccgttttggacactgtgttactc
agacctaaagaaaagaatgatgtagagtattatagtgagactcaagagctattgcgaaca
gagattgtgaatcctcttagaatatatggatatgtatgtgctacaaaaataatgaaactg
aggaaaatacttgaaaaagttgaggctgcatcaggattcacttcagaggaaaaagatcca
gaagaatttttgaatattttgtttcatcatattctaagagttgagccactgttgaaaata
agatcagcaggtcagaaagtacaagactgttatttctaccaaatttttatggacaaaaat
gaaaaagttggagtcccgacaattcagcagttactggagtggtcgttcatcaacagcaac
ttgaagtttgcagaggctccttcttgcctgattattcagatgcctcgatttggaaaagac
ttcaaaatgttcaacaaaatttttccatccttggagctaaatataacagatttacttgaa
gacactcccaggcagtgccgtatttgtggaggacttgctatgtacgagtgcagagaatgt
tatgaagacactgaaatttctgctggaaaaatcaagcagttctgcaaaacctgcaataca
caagttcatcttcatcccagaagacagagtcataaattcaatccattgtcactccctaaa
gatctgccagactgggattggagacatggctgtatcccataccagaagatggagttgttt
gcagttctctgcatagaaacaagccactatgtagcttttgttaagtatgggagagatgac
tccgcctggcttttcttcgacagcatggcagatcgggatggaggtcagaatggctttaac
attccacaagtcaccccgtgcccagaagttggtgaatacctgaagatgtctgtagaagaa
ctgcactcactggattccaggaagattcaaggttgtgctcgaagactgctctgtgatgct
tacatgtgcatgtatcagagtccaaccatgagcttatacaaatga

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