KEGG   Coturnix japonica (Japanese quail): 107325136
Entry
107325136         CDS       T04297                                 
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42 isoform X1
  KO
K12835  ATP-dependent RNA helicase DDX42 [EC:3.6.4.13]
Organism
cjo  Coturnix japonica (Japanese quail)
Pathway
cjo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107325136 (DDX42)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cjo03041]
    107325136 (DDX42)
Spliceosome [BR:cjo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    107325136 (DDX42)
 Complex B
    107325136 (DDX42)
 Complex C
   U2 SnRNP specific factors
    107325136 (DDX42)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA ERCC3_RAD25_C DUF460
Other DBs
NCBI-GeneID: 107325136
NCBI-ProteinID: XP_015741154
LinkDB
Position
27:2255562..2271191
AA seq 953 aa
MNWNKGGPGTKRGFGFGGFAITPGKKEEPKLSQQSHSAFGTAGSSAAFAKSGPPQLPSFY
KIGSKRANFDEENAYFEDEEEDNSNVDLPYIPAENSPTRQQFNSKSADSDSDDDPLEAFM
AEVEDQAARDMKRLEDKDKEKKNAKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDN
LEYDSDGNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLN
LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTG
SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAV
YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQ
VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPS
GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKV
ISEFKKKGIPILVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNPWFRKSRFKGGKGKKLNIGGGGLGY
RERPGLGSESSDRGNNNNVMSNYEAYKPSSGAMGDRLTAMKAAFQSQYKSHFVAASLNNQ
KTGSSAAGASGWTSAGSLNSVPTSSAQQNAANPDSPIAATAAAKGVPGFTSTGTLSSVPT
FPSVGVQGYSNNSANASAGNREGNREGNREGNREGMGSAGSTPRGGSGGGGGVVRERYND
SRNSRHNEVPRRGEGGGRYNDMQHHGEGGGRYSDAYRHGEGRHGDSHRHAESRHFTDTGG
GNRNNVDSRNMSEGRSNESRNGENRKDANSRDNKTDGFAVPEPPKRKKSRWDS
NT seq 2862 nt   +upstreamnt  +downstreamnt
atgaattggaataaaggtggacccggtacgaagagaggctttggttttggtggatttgcc
ataacacctggaaagaaagaggagccgaagctttctcagcagtctcacagtgcttttgga
acagccggttcttctgctgcgtttgcgaaatcgggacctccccagctgccttctttctac
aaaattgggtcaaagagagcaaatttcgatgaagaaaatgcgtactttgaggatgaagag
gaagataacagcaatgtcgacttgccatacatacctgcagagaattcccccactcgccag
cagttcaattccaaatcggccgactctgacagcgacgatgatcctttggaggcattcatg
gctgaagtggaggatcaagctgctcgagacatgaagaggctggaggataaagacaaggaa
aaaaagaatgctaagggtattcgagatgacattgaagaggaagatgaccaagaagcttat
tttcgctacatggctgaaaaccccactgctggtgtggtgcaagaagaggaagaggataac
ctggaatatgacagtgatgggaatccaattgcaccatccaaaaaaatcattgatcctctt
ccacctattgaccattcagagattgaatatcccccatttgagaaaaatttctatgacgag
catgaagagatcaccagtctgaccccacagcaggtggtggagttacggcacaagctgaac
ctgcgggtctccggtgctgctcctccaagaccaggcagtagttttgctcattttggattc
gatgagcagctaatgcatcaaattaggaaatctgagtatacccaacccacgcctatacaa
tgtcagggtgttccagttgccatgagtggcagagatatgattgggatagctaagactgga
agtggaaaaacagcagccttcatctggccaatgctgattcacatcatggatcaaaaagag
cttgaaccaggagatggccccattgcagtgattgtatgtccaaccagagagctttgccaa
cagatccattctgaatgtaagcgctttggaaaggcgtacaacctgcgctcagtggcagtc
tatggaggagggagcatgtgggagcaagccaaagccctccaggagggggcagagatcgtc
gtttgtacaccaggtcgtttgattgatcatgtgaaaaagaaagcaacaaaccttcaaaga
gtcacttaccttgtgtttgatgaagcagacagaatgttcgatatggggtttgaataccag
gtcagatcaattgcaagccacgtgcgtccagacagacagacccttttgttcagtgccacc
ttccgtaagaagattgagaagttggcccgagatattctgatcgaccccattcgagtggtg
cagggagacattggagaggcaaatgaagatgttactcagatagtggagattttcccctct
ggtcccagcaagtggaactggctgacacggcgcctcgtggagttcacgtcttctggcagt
gttctcctgtttgtcactaagaaggcaaatgctgaagagctggctaataacctcaagcag
gaggatcataacctggggctccttcatggtgacatggaccagagcgagaggaataaagtc
atttcagagtttaagaaaaaggggatcccgatactggtagctactgatgtagcagctcgt
gggttggatattccttccattaagactgtaattaattacgatgtggctcgggacatcgac
acacacacccacagaattggacgtactggcagagcaggcgagaagggagttgcctacacc
ctgctgacccccaaggacagtaactttgctggggaccttgtcagaaatctggaaggtgct
aatcaacacgtttccaaagagctgttggatctggcaatgcagaatccatggttccggaaa
tcccgtttcaaaggaggaaaaggcaagaagctgaatattggtggtggtggcttaggatat
cgcgagcgtcctggtctgggatcagagagttctgaccgtggcaacaacaacaatgtgatg
agtaactatgaagcgtacaagccgtcatctggggcaatgggagacagacttacagcaatg
aaagcagcttttcagtctcagtataagagccactttgttgctgcaagcttaaataatcaa
aagactggaagctctgctgctggtgcgagcggctggactagtgctgggagcttgaactca
gtacctacaagttctgcacaacaaaatgctgcaaaccctgacagccccattgcagccacc
gcagcagcaaagggcgtcccaggtttcaccagcaccgggactctgagcagcgttcccacc
tttcccagcgtcggagtgcagggctacagcaacaacagtgcaaatgccagtgctggcaat
cgggaaggcaatcgggaaggcaatcgggaaggtaatcgggaaggcatgggcagcgccggc
agcactcctcgtggtggcagtggtggaggtggaggcgttgttagggaacgctacaacgac
agcaggaacagtcggcacaacgaggtaccgcgccgaggggagggcggtggtcgctacaac
gacatgcagcaccacggagaaggaggtggtcgctacagtgatgcctatcggcacggggag
ggccgacacggggacagccatcgccacgctgaaagccggcacttcactgacacgggcggc
ggcaatcgcaataacgttgacagcaggaacatgagcgaagggaggagcaacgagagcagg
aatggtgagaacaggaaggatgccaacagccgagacaacaagacagatggtttcgctgtc
ccagagcccccaaaacgtaagaagagccgatgggacagttag

DBGET integrated database retrieval system