KEGG   Campylobacter jejuni subsp. jejuni YH001: QZ67_00646
Entry
QZ67_00646        CDS       T03744                                 
Symbol
rnr_1
Name
(GenBank) Ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
cjy  Campylobacter jejuni subsp. jejuni YH001
Pathway
cjy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cjy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QZ67_00646 (rnr_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjy03019]
    QZ67_00646 (rnr_1)
   03016 Transfer RNA biogenesis [BR:cjy03016]
    QZ67_00646 (rnr_1)
Enzymes [BR:cjy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     QZ67_00646 (rnr_1)
Messenger RNA biogenesis [BR:cjy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     QZ67_00646 (rnr_1)
Transfer RNA biogenesis [BR:cjy03016]
 Prokaryotic type
  tRNA degradation factors
   QZ67_00646 (rnr_1)
SSDB
Motif
Pfam: RNB Orthopox_F14
Other DBs
NCBI-ProteinID: AJA54749
LinkDB
Position
complement(589918..591534)
AA seq 538 aa
MVLKKANETSLVITKRYGQAVLGMNIKTGLSTALKASQKSLKALPLGTILKIENENNNII
EVLGHIDDESVDEKISLALFNKNNEFSDACIKEALANGDSVDASMYENRMDLRALPFCTI
DPIHAKDFDDAIYFDTQKREIYVAIADVSEYVYAYSAIDKEARNRGFSIYFPHIAIPMLP
RPLSENICSLKPHLDRLAYCFKITLNHENKVIKEELFEGIINSKHRFNYDEVDEILIQKP
DLKELSWLYELFEITKNLRKMRLKNAFEFRTEELRMNLDENLSLKSTVFEKDTPSHNLIE
DCMLLANKAAAKLIDIGVFRNHLSADARKIDKLLNELRELGIDVNFKPNLPELIRDIQAL
ADELNLRAEVDKLIIKAQKKAEYSSINAGHFGLGFDKYSHFTSPIRRYSDLILHRLLKAK
QKNDEKLFNYLLLNIESTCESLSTLEREADKVAFDFMDRKFARWAAKNIGKKFKALVVQN
DGVCIAKLDDEIKGADIILYDTRVNLLESVEVQIMEADIVMAKIYAKITQKLIKEENV
NT seq 1617 nt   +upstreamnt  +downstreamnt
ttggttttaaaaaaagccaatgaaacttctttagtgatcaccaaaaggtatggccaagcc
gtgcttggaatgaatatcaaaacaggattaagcactgccttaaaagcttctcaaaaatcc
ttaaaagcactgcctttagggacaattttaaaaatagaaaatgaaaataacaacatcata
gaagttttagggcatatcgatgatgaaagcgtagatgaaaaaatctctttagctcttttt
aataaaaataacgaatttagcgatgcttgcattaaagaagccttagcaaacggagatagc
gttgatgcgagtatgtatgaaaaccgcatggatttaagagccttgcctttttgcaccata
gatcccatacatgcaaaagattttgatgatgcgatttattttgacacccaaaaacgagaa
atttatgtagctattgctgatgttagcgaatatgtttatgcttatagcgctatagataaa
gaagcaagaaatcgtggattttctatttattttccacatattgctatacctatgctacct
cgtcctttaagtgaaaatatctgttctttaaaacctcatttagatcgcttagcgtattgt
tttaaaatcacactcaatcatgaaaataaggtcataaaagaagaactttttgaaggtatt
atcaactcaaaacaccgttttaattacgatgaagttgatgaaattttgatacaaaaacct
gatttaaaagagctttcatggctttatgagctttttgaaatcacaaaaaatttacgcaaa
atgcgtcttaaaaatgcctttgaatttcgcaccgaagaattaagaatgaatttagatgaa
aatttaagtctaaaaagcacagtttttgaaaaagacacgccttcgcataatttgatcgaa
gattgtatgcttttagccaataaagccgcagcaaaactcatagatataggtgtttttaga
aatcacttaagtgctgatgcaagaaaaatcgataagcttttaaatgaattacgcgaacta
ggcatcgatgtaaattttaaacccaatcttcctgaactcatacgcgacatacaagcttta
gccgatgagttaaatttaagagcagaagtagataaactcatcatcaaagcacaaaaaaaa
gcagaatattccagtataaatgcagggcattttggcttaggttttgataaatactcacat
tttacaagccctataagaaggtattctgatcttattttacacagacttttaaaagccaaa
caaaaaaacgatgaaaaactttttaactatctgcttttaaacatagaaagcacttgcgag
agtcttagcacgcttgaaagagaagcggataaggttgcttttgattttatggatagaaaa
tttgctagatgggcagctaaaaatataggcaaaaaatttaaagctttagttgtgcaaaat
gatggagtttgcatagctaaactagatgatgaaatcaaaggagcagatataatcctttat
gatacgcgtgtaaatttgctagaaagtgttgaagtgcaaatcatggaagcggatatagtt
atggcaaaaatttatgctaaaatcacccaaaaacttataaaggaagaaaatgtatag

DBGET integrated database retrieval system