Caldicellulosiruptor acetigenus I77R1B: Calkr_1201
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Entry
Calkr_1201 CDS
T01356
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
cki
Caldicellulosiruptor acetigenus I77R1B
Brite
KEGG Orthology (KO) [BR:
cki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cki03009
]
Calkr_1201
Enzymes [BR:
cki01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Calkr_1201
Ribosome biogenesis [BR:
cki03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Calkr_1201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
TruB_N
Motif
Other DBs
NCBI-ProteinID:
ADQ40709
UniProt:
E4S745
LinkDB
All DBs
Position
1255679..1256377
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AA seq
232 aa
AA seq
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MRLDKFLTHCGFGSRSQVKKLIREGIVTVNGKRIVEVDFKINPEEDVVEVDGRVAKFSRQ
IYIMMNKPKGYVCSNDDPASLTVFSLISDDLKYRDLHTVGRLDKDAEGLLIITDDGEYTH
RVISPKKRIEKEYLVRLEKEVDEEKLKEFENGIILDDGYKTLPAKYTIIDSTTVKLCIYE
GKYHQVKRMFEAIGNKVVDLKRLRIGGLNLDQNLKPGEYKVIDREEAYLVFE
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgagacttgataagtttctgactcactgtggttttggttcacgaagtcaggttaaaaag
ttaataagagaaggaattgtgactgtaaatgggaaacgaatagtagaagttgattttaag
attaatcccgaagaagatgtagtagaagtcgatggcagggttgcaaagttcagtagacag
atttatatcatgatgaacaaaccgaaaggttatgtgtgctcaaatgacgacccggcatca
cttacagtgttctcacttatttctgatgatttaaagtatcgagatttgcatacagttgga
aggcttgacaaagacgcagaaggtcttttgataattacagatgatggtgaatatacgcac
agagttatctcacccaaaaaaagaattgaaaaagagtatttagtaaggcttgaaaaagag
gtggatgaggaaaagctgaaagagtttgaaaatggtattattttagatgatggttataag
acacttcctgcaaaatatactattattgatagtaccacagtaaaattgtgcatatatgaa
ggtaaatatcatcaggttaaaaggatgttcgaagcaattggaaataaggtggtggactta
aaacgtctgagaataggaggtcttaatttagaccaaaatttaaaaccgggtgaatacaag
gttatagacagagaagaagcttacttagtttttgaataa
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