Clostridium kluyveri DSM 555: CKL_0002
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Entry
CKL_0002 CDS
T00564
Symbol
dnaN
Name
(GenBank) DnaN
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
ckl
Clostridium kluyveri DSM 555
Pathway
ckl03030
DNA replication
ckl03430
Mismatch repair
ckl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ckl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CKL_0002 (dnaN)
03430 Mismatch repair
CKL_0002 (dnaN)
03440 Homologous recombination
CKL_0002 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ckl03032
]
CKL_0002 (dnaN)
03400 DNA repair and recombination proteins [BR:
ckl03400
]
CKL_0002 (dnaN)
Enzymes [BR:
ckl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CKL_0002 (dnaN)
DNA replication proteins [BR:
ckl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CKL_0002 (dnaN)
DNA repair and recombination proteins [BR:
ckl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CKL_0002 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
EDK32089
UniProt:
A5N458
LinkDB
All DBs
Position
1615..2718
Genome browser
AA seq
367 aa
AA seq
DB search
MKFLCTKNKLQESIFTVQKAITGKSSMPVLNGILLEAYNDTIRLTGSDIDLSIITTIQAE
VQEEGSIVIDSRIFGDIIRKLPNDNIYISTTENNSVEILCQKSKFNIIHMNAEDFPEIPN
INENIFFSIPQNTLKNMIKSTIFATAQDEARPILTGILFEIKNKKLNLVALDGYRLALKS
EFLDNENVINAVIPGKTLNEVSKILDDDNENVNITFTPNHILFNLINTKIISRLLQGEFI
KYNSIIPEEYNLRVTAKKSELLDCIERASLMAKDSNTNLIKLKIEQNNMIITSNSQIGMV
REELNILLEGDTLQIAFNSKYLIDVLRIMEDEEIVMEFSGSVSPCIIKNSKKNNCIYLVL
PVRLLNN
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcctatgtacaaaaaacaaattgcaagaatccatatttacagttcaaaaagca
ataactggtaaatccagtatgcccgtattaaatggtatacttttagaagcttataacgat
acaataagactaacgggttctgatatagacttaagtataataacaaccatacaagcagaa
gtacaagaagaaggatccatagtaattgattctagaatatttggagatatcatacgaaaa
ttaccaaacgataatatatatatatccacaactgagaataactctgtagaaatattgtgc
caaaaatcaaaatttaatattattcacatgaatgcagaagattttcctgaaatacctaat
ataaatgaaaatatatttttttctatacctcaaaatacattaaaaaatatgataaaaagt
actatatttgctacagcacaagatgaagcgagacctatacttacaggtattttatttgaa
attaaaaataaaaaattaaatctagtggctttagatggatatagattagctttaaaatcc
gaatttttagataatgaaaatgtaataaatgctgttattccaggaaaaacgttaaatgaa
gtttcaaagattttagatgatgataatgaaaatgtaaatataactttcactcctaatcac
atattatttaatctaataaatacgaaaattatatccagactgttacaaggagaatttata
aaatataattctataattcctgaggaatataatcttagagtgacggctaaaaaaagtgaa
ttgttggattgtattgaaagagcttcattaatggccaaggacagtaatacaaatttaata
aagctaaaaatagaacagaataatatgattataacttctaattctcaaataggaatggtt
agggaagagttaaatatattgttagaaggagatacacttcaaattgcatttaattcgaaa
tacttaatagatgtacttaggataatggaagatgaggaaattgtgatggaattttcaggt
agtgtaagcccttgtattataaaaaacagcaaaaaaaataattgtatttacttagtactg
ccagtaaggctattaaataattaa
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