Citrobacter koseri: CKO_04188
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Entry
CKO_04188 CDS
T00592
Name
(GenBank) hypothetical protein
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cko
Citrobacter koseri
Pathway
cko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CKO_04188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cko03400
]
CKO_04188
Enzymes [BR:
cko01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CKO_04188
DNA repair and recombination proteins [BR:
cko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CKO_04188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
NLE
Motif
Other DBs
NCBI-ProteinID:
ABV15249
UniProt:
A8AP36
LinkDB
All DBs
Position
complement(3894240..3897608)
Genome browser
AA seq
1122 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEFIVERDRLDDPFEPELVLVQSTGMAQWLQMTLSQKFGIAANI
DFPLPASFIWDMFVRVLPDIPKESAFSKQNMSWKLMTLLPQLLEREDFTLLRHYLTDDAD
KRKLFQLSSRAADLFDQYLVYRPDWLTQWEAGQMVDGLGEAQIWQAPLWKALVEYTAELG
QPCWHRANVYQRFIQTLENATTSPTGLPSRVFICGISALPPVYLRALQALGKHIEIHLLF
TNPCRYYWGDIRDPAWLAKLVARQRRHSFEERDLPLFRDNQRAGELFNSDGEQDVGNPML
ASWGKLGRDYIYLLSELENTQELDAFVDIPPDNLLHNIQADILELESRAVAGVNLEEYAR
SDNKRLLDPNDASVTFHVCHSPQREVEILHDRLLAMLEADPTLMPRDIIVMVADIDSYSP
FIQAVFGSAPAERYLPYAISDRRARQSHPVLQAFISLLSLPDSRFVSEDVLALLDVPVLA
ARFNINEEGLRYLRLWVNESGIRWGIDDDNVRELALPATGQHTWQFGLTRMLLGYAMESA
QGEWQSVLPYDESSGLIAELVGHLASLLMQLNLWRRGLAQARPLEEWLPVCRDMLNDFFL
PDAETEAAMTLIEQQWQAIITEGLEAEYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN
ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPMRGDRSRRDDDRYLFLEAL
ISAQQTLYISYIGRSIQDNSERFPSVLVQELMDYIGQSHYLPGDEELTSDESEARVKAHI
ARLHTRMPFDAQNYLPGEQQSYAREWLPAASQSGEAHSDFVQPLPYELPETLTLEKLQRF
WAHPVRAFFQMRLQVNFRAEESEIPDTEPFILEGLTRYQLNQQLLNTLVEEEDAGLLFRR
FRAAGDLPYGAFGEILWDTQRQEMQSLADRIIACRQPGKSMEVDLLCNGVQITGWLPQVQ
EDGLLRWRPSLISVAQGMQLWLEHLVYCACGGKGESRLFLRKEGEWRFPPLEAEQALTYL
AQLIDGYREGMSSPLLVLPESGGAWIKACYDATNNAMLDDADTLQKARTKFLQAYEGNMV
IRGEGDDIWYQRLWRQLEPKTIESIISQSQRYLLPLFRFNQS
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtctaccactccaaccgtctggacgtgctggaagcgttaatggaattcatc
gttgagcgcgatcggcttgacgatccttttgaacccgaacttgtgttggttcaaagtacc
ggtatggcgcagtggctgcaaatgaccctttcgcagaaatttggtatcgccgcgaatatc
gattttccgctacccgcgagttttatctgggatatgtttgtacgcgtgctgcctgatatc
ccgaaagagagcgcgttcagcaagcaaaacatgagctggaagctgatgacgctgctgccg
caactgctggagcgtgaagattttacgctactgcgccactatctgacggacgacgctgac
aagcgcaagctattccagctttcctcgcgtgccgccgatcttttcgatcagtatctggtc
tatcgccccgactggcttacccagtgggaggcggggcagatggttgacgggttaggggag
gctcagatctggcaggcgccgctgtggaaggcgctggtggaatacacggctgaactgggg
cagccgtgctggcaccgtgcgaatgtgtatcagcgttttatccagacgctggaaaatgcg
acaaccagcccgacggggctgccttcgcgcgtctttatttgtggtatttccgcgctgccg
ccggtgtatctccgggccttgcaggcgctgggaaagcacatcgaaatccatctgctgttc
actaacccctgtcgttattactggggggatatcagagatcctgcctggctggcaaaactg
gtggctcgtcagcgtcgtcacagctttgaggagcgcgacttaccgctgtttcgcgataac
caacgcgccggggagttatttaatagcgacggcgagcaggatgtcgggaacccgatgctg
gcgtcctgggggaaactggggcgggactacatttacttgctttccgaactggaaaacaca
caggaactggatgcgtttgtcgatattcccccggacaatctgcttcataacattcaggcg
gacatccttgagctggaaagtcgcgccgtggctggggtgaacctcgaagagtacgcccga
agcgacaacaagcgtctgcttgacccgaatgacgccagcgtgacctttcacgtatgccat
agcccgcagcgtgaagtggagatcctgcatgatcgtctgctggcgatgctggaggccgac
ccgacgctgatgccgcgcgatattatcgtcatggtggcggatatcgacagctatagcccc
tttattcaggccgtatttggcagtgcgcctgccgaacgctatctgccttatgccatctcc
gatcgccgggcgcgtcagtcgcatcctgttttgcaggcgtttatcagcctgctgtcgttg
ccggacagccgttttgtctctgaagatgtgctggcgctgctggacgtgccggttctggcg
gcccgatttaacatcaacgaagaagggctgcgctatcttcgcttatgggtcaatgagtcg
ggtatccgctgggggattgatgacgacaacgtgcgcgagctggcgcttcctgcaacgggg
cagcatacctggcaatttggcctgacgcgtatgctgctgggttacgcgatggaaagcgcg
cagggcgaatggcagtccgtgctgccttatgacgagtccagcgggctgattgcggagctg
gtcgggcatctggcgtccctgcttatgcagttgaacctctggcgtcgcgggctggcgcag
gcgcgtccgctggaagagtggctcccggtttgccgcgacatgctcaatgactttttcctg
cccgatgcggaaacggaagccgcaatgacccttatcgagcagcaatggcaggcgattatc
accgaagggcttgaggcggagtatggcgatgcggtgccgctgtctctgttacgggacgag
ctggcgcaaaggctggatcaggaacgcatcagccagcgttttctggcggggccggtaaac
atctgtacgctcatgcctatgcgttctatcccctttaaggttgtgtgtctccttggtatg
aatgacggcgtctatccgcgtcagctggcgccgctcggttttgacctgatgagtcagaaa
ccgatgcgcggggatcgtagccgtcgcgatgatgaccgctacctgttccttgaggcctta
atctctgcgcagcagacgctctatatcagctacatcgggcgctctattcaggataacagc
gaacgtttcccgtcagtcctggtgcaggaactgatggattatatcgggcaaagtcactat
ttgccgggagatgaagaactgaccagcgatgagagcgaggcccgcgtgaaagcgcatatc
gctcgcctgcacacgaggatgccgtttgatgcgcaaaactatcttcccggagaacagcaa
agctacgcgcgcgaatggctgcctgctgcaagtcagtcaggcgaggcccactctgatttt
gtacagccgttgccctatgaactccctgagacgttgacgctggaaaaacttcagcgcttc
tgggcgcatccggtgcgggcgtttttccagatgcggctacaggtgaatttccgcgcggaa
gagagtgaaattcccgatacggagccgttcattctggaagggctaacccgctatcagctt
aatcagcagttgcttaatacgctggtcgaagaagaggatgccgggcttttattccgtcgc
ttccgggcggcgggcgatctcccgtatggcgcttttggcgagatcctctgggatacgcag
cgtcaggagatgcagtcgctggcggacaggattatcgcgtgtcgtcagccggggaaaagt
atggaagttgatctgctctgcaatggcgtgcagatcacggggtggttgccgcaggtgcag
gaagacggtttgttgcgctggcgcccatctttaataagcgttgcgcagggaatgcaactt
tggctggaacaccttgtctattgtgcctgtggcggaaaaggcgaaagtcgtttgttcctg
cgtaaagagggagagtggcgcttcccgccgttagaggctgaacaggcgttaacttacctc
gcacagctgattgacggttatcgggaagggatgtcatccccactgctggttcttcctgaa
agcggcggcgcatggataaaagcttgttatgacgcgacgaataatgccatgttagatgat
gctgacacgctgcaaaaagcccggacgaagttcttgcaggcttatgaaggtaacatggtg
atacgcggagaaggggatgatatctggtatcaacggttgtggcgtcagctggagccgaag
acgatagagagcattatttctcagtctcaacgttatctgttaccgctatttcgttttaat
cagtcgtga
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integrated database retrieval system
