Clostridium kluyveri NBRC 12016: CKR_1280
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Entry
CKR_1280 CDS
T00832
Name
(GenBank) hypothetical protein
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
ckr
Clostridium kluyveri NBRC 12016
Pathway
ckr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ckr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CKR_1280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ckr03400
]
CKR_1280
Enzymes [BR:
ckr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKR_1280
DNA repair and recombination proteins [BR:
ckr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CKR_1280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecG_wedge
Helicase_C
ResIII
RecG_dom3_C
SNF2-rel_dom
tRNA_anti-codon
AAA_30
UvrA_inter
IstB_IS21
SLFN-g3_helicase
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
BAH06331
UniProt:
B9E1F6
LinkDB
All DBs
Position
1421976..1424024
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AA seq
682 aa
AA seq
DB search
MIYMNVYDDIKSIKGVGAVTAGTLNSCCIFNILDLLLYFPRDYEIISNCSDLNKVGTGKV
IMDCRVKSIGKDIRTKSKKILSTVVFENESGTFQGKWFNQPYMKNKFKINKVYRIMGKIE
RFNGSISIMNPTLVSNEVNSKKEDKIIPIYPLKSGITNNILIKLISKVIHEVDIEENLPT
WIIKKYKFCSLNKAIKAIHKPGSIEELEEAKRRLKFQELFSYSLKILMLKNYHSRNKKGI
AFKIASELKELKKRIPYELTKSQNKVIREILLDEKMESPMNRLLQGDVGSGKTIVAIIAI
FNVVKNGYQAVFMAPTEILAKQHYEECKKFLQDTGVNIQLLCGSVTERNKKILKEDLKYG
KIDIIIGTHALIEDDVEFKNIGMVVTDEQHRFGVAQRSKLINKGKYVDTLVMTATPIPRT
LSLCLHGDLNISIIDELPPGRKKIHTYYTDKKSKDRVYKFAVEEIKKGRQVYVVCPLVEQ
NDNLHLSSVKEIYDKLKEKYFKDLEIGVLYGKMSSSSKEETMNKFKNGEIKAIISTTVIE
VGVNVPNAAVMIIENAERFGLAQLHQLRGRVGRGEYKSYCILIADIKNDFVRRRMEIMKS
SNDGFFIAEEDLKIRGSGEIFGFKQHGENELIFSNLSEDIHIFKLANLEAKRFLESKGSK
DEKITKELMDKLQKTFKIISFN
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
gtgatatatatgaatgtatatgatgatattaaatctataaaaggagtgggggctgtgact
gctggaaccctaaatagttgttgtatattcaatatattggacctgcttttatattttccc
agggattatgaaattatctctaactgcagcgatttaaataaagttggaactggaaaggtt
ataatggattgtagagtaaaatctataggaaaagatataagaactaagagtaaaaagata
ctttctacggttgtatttgaaaatgagagtggaacttttcaaggtaaatggttcaatcag
ccttacatgaaaaacaaatttaagataaataaggtttataggataatggggaagattgaa
agatttaatggaagtatttctattatgaatcctactttggttagtaatgaggtaaatagt
aaaaaagaggataagataataccgatttatcccttgaaatccggtattacaaataatatt
cttataaaacttatatctaaagtgattcatgaggtggatatagaagaaaatttgcctact
tggataattaaaaaatataaattttgcagtttgaataaagctataaaggcaatacataaa
ccaggcagtatagaagaattggaggaagcaaagagaagacttaaatttcaagaattgttt
tcctactctttgaaaattctaatgttaaaaaattatcatagtagaaataaaaaaggtata
gcttttaaaatagcctcagaattaaaagaattaaaaaaaagaataccttatgagcttact
aaatctcagaataaggttataagagaaatattactagatgaaaaaatggagtcacctatg
aatcgattgttacagggagatgtgggcagtggaaaaaccatagtggctatcatagctatt
ttcaatgtagtaaaaaatgggtatcaggcagtttttatggctcctacagaaatacttgca
aagcagcattatgaagaatgtaaaaagtttttacaagatacaggagtaaatatacagtta
ctttgcggcagtgttactgaaagaaataaaaaaatattaaaagaagatttaaaatatggg
aagatagatattataataggaactcatgctctcatagaagatgatgtggagtttaaaaat
ataggaatggtagttacagatgaacaacatagatttggagtggctcaaaggagcaaactc
ataaataaaggtaaatatgtagatactttagttatgacagcaacacctattccaagaact
ttaagtttatgtctacatggagatctaaacatatctattatagatgaacttcctcctgga
agaaaaaaaatacatacttattatacagataaaaagtcaaaggacagggtttataaattt
gcagtggaagagataaaaaaaggcaggcaagtatatgtagtgtgtcctttagtagaacaa
aatgataatctacatttaagttctgtaaaagaaatttatgataaattgaaagaaaaatat
ttcaaagacttagagataggtgtattatatggcaagatgtcatctagttcaaaagaagaa
actatgaataaatttaaaaatggggaaataaaagccattatatctacaacagttatagaa
gtgggcgttaatgtaccaaatgctgcagttatgataatagaaaatgcagagaggtttgga
ctggcacagcttcatcagctgaggggaagagttgggagaggagaatataaatcctattgt
attttaattgcagatattaagaatgacttcgtaaggagaagaatggaaataatgaaaagc
agcaatgatggattttttattgcagaggaagatttaaaaataagaggttcaggagagatc
tttggattcaaacagcatggggaaaatgaattgattttttcaaatttatcagaagatata
catatatttaagttagctaatctagaagcaaaaaggttcttagaaagcaaaggaagtaaa
gatgaaaagatcacaaaagagcttatggataaactacaaaagacttttaaaattataagt
tttaattag
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