Campylobacter lari RM2100: CLA_0892
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Entry
CLA_0892 CDS
T00858
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cla
Campylobacter lari RM2100
Pathway
cla03030
DNA replication
cla03430
Mismatch repair
cla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLA_0892 (dnaE)
03430 Mismatch repair
CLA_0892 (dnaE)
03440 Homologous recombination
CLA_0892 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cla03032
]
CLA_0892 (dnaE)
03400 DNA repair and recombination proteins [BR:
cla03400
]
CLA_0892 (dnaE)
Enzymes [BR:
cla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLA_0892 (dnaE)
DNA replication proteins [BR:
cla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLA_0892 (dnaE)
DNA repair and recombination proteins [BR:
cla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLA_0892 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
PIN_9
Motif
Other DBs
NCBI-ProteinID:
ACM64217
UniProt:
B9KCC8
LinkDB
All DBs
Position
complement(850498..854091)
Genome browser
AA seq
1197 aa
AA seq
DB search
MSQFTHLHLHTEYSLLDGANKLKELAKTLKAQGATSVAMTDHGNMFGAIDFYKTMRAEGI
KPIIGLEAYLHNHDDISDKSSRQRFHLCLFAKNEIGYKNLMYLSSQSYIHGLYYYPRINK
KLLEAHSDGLICSSACLQGEINWHLNTKNERNIKFGAKGYEGAKEAALWYKKVFGDDFYL
EIMRHGIDDQKFIDDSIIKLAKELDIKIIATNDTHYTFKERAAAHEVFMCIAMGVKLDDP
GRLRHEVHEFYVKTPEQMSELFADIPEAIENTQEIANKCNLELKLGDPTPPNFKFTREYA
KKYSLNLAQEDQEFSFDNDDIVFEYLCKKGLEERLQFIDESKHQEYKDRLDLEISIIKNM
KFSGYMLIVHDFIAAAKEKDIPVGPGRGSAAGSLVSYCLKITDLDPIPYNLLFERFLNPE
RVSMPDIDVDFCQDRRGEVIDYVIDKYGAEKVAQVITFGKLLAKGVIRDVARVCDMSIPD
ADALAKLVPEELKITLEKAYEQEPKIAEFVNSHPKGRQVWDFAKALEGLNRNAGLHAAGV
VISNEALWNKAPLFRQSKNDERHLVTQYSKEYLEDVDLIKFDFLGLKTLTVIDNAIKLVK
KRYGKDVIWEKIDMNDPKVYKTIQSGNTLGIFQIESGGMQSLNARLKPERFEDLIAVLAL
YRPGPLDSGMVDDFIDIKHGRKAATYAFDDLKPILENTYGVIVYQEQVMQIVQKIGGFSL
GGADNVRRAMGKKKREILDNLKAEYLEGAKKQGYDEKKADDLFELILKFAEYGFNKSHSA
AYALITFQTAYLKTYYPSEFMAALLTSEESNVDKVAKYIEEMKRMNIKLLPPSVNKAQRE
FSATKLEDGSEAIIYGLGAIKSVGIPAIENIMTIRKEEGFSDFDDFISSIDPTKINKKTI
ENLAKSGAFDEFGYTRKCLVDNLELISETSRKIAEVKRNSTASLFGEEEIAADIKVGLHD
SKVEFELMEKLGYEKEILGIYVSGHPLDKFASQIEGIDYFKSMDFETLKGEGELLVVGKI
EDFKSMMSKSGKRYAKAVVLDFYSSFDMIIFETQVEKVETLFKESKDEAFAFLLRYKNND
NDLSFSLNEIYTLEEAKENELKSFSKKKSFVKKENKEDFTQDPMKFEENIIELDINKLSK
DMVYEIYDLANTRHNPKDANNKKLVLKVLDMGSCLLYHTNFVLSQEAMDVIAQKCKG
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatttacacatttacatttacatacagaatattctttacttgatggagcaaat
aaactcaaagagctagctaaaacgctaaaagcacaaggtgcaacaagtgttgctatgact
gatcatggaaatatgtttggtgctattgatttttataaaacaatgagagctgaaggaatt
aagcctattatagggcttgaagcatatttacataatcacgatgatataagtgataaaagc
tcaagacagcgttttcatctttgtttatttgccaaaaatgaaattggttataaaaatttg
atgtatttgagctcgcaaagttatatacatggcttgtattattacccaaggattaataaa
aagcttttagaggctcatagtgatggtttgatttgctcttctgcgtgtttgcaaggtgag
attaattggcatttaaataccaagaatgaaagaaatataaaatttggcgcaaagggttat
gagggtgcaaaagaagcagctttatggtataaaaaggtttttggagatgatttttacctt
gaaattatgcgtcatggtattgatgatcaaaaatttattgatgattctatcatcaaactt
gctaaagagcttgatataaaaattattgcaactaatgatacgcattacacttttaaagaa
agagcggctgctcatgaagtatttatgtgtattgctatgggggttaagcttgatgatcca
gggcgtttaagacatgaggtgcatgagttttatgtaaaaacgccagagcaaatgagcgag
ctttttgctgatattcctgaagccattgaaaatactcaagaaatagctaataaatgcaat
ttagaattaaaactaggcgatccaaccccaccaaattttaaatttacccgtgaatatgca
aaaaaatatagtttaaatctagcacaagaagatcaagaatttagctttgataatgatgat
atagtttttgagtatctttgtaaaaaaggcttagaagaaagacttcaatttatcgatgag
agtaagcaccaagagtataaagataggcttgatttagaaattagtattattaaaaatatg
aaattttcaggttatatgttaatcgttcatgattttatcgccgcagctaaggaaaaagat
ataccagttggcccagggcgtgggagtgctgcggggagtctagtttcgtattgtttgaaa
attacagatttagatcctataccttacaatcttctttttgagagatttttaaatcctgag
cgtgtatcaatgcccgatattgatgtggatttttgtcaagatagaagaggggaagtgatt
gattatgtgatcgataaatatggagctgaaaaggttgcacaagtcattacctttggtaag
cttttagcaaagggagtaatccgtgatgtagctagggtttgtgatatgagcatacctgat
gcggatgctttggcaaaattagttcctgaagagctaaaaattactttagaaaaagcctat
gagcaagaaccaaaaatagctgaatttgtaaattctcatccaaaagggcgtcaagtttgg
gattttgctaaagcactagagggtttaaatagaaatgcaggtttgcacgcggccggagtt
gtgatatctaatgaagctttgtggaataaagctccgctttttagacaaagcaaaaacgat
gagcgccatttggtaacgcagtattctaaagaatatcttgaagatgtggatttaattaaa
tttgactttttgggtttaaaaacccttacagtaattgataatgcgattaagctagtgaaa
aagcgttatggtaaagatgtaatttgggaaaagattgatatgaatgatcctaaggtttat
aaaaccatacaaagtggtaataccttgggcattttccaaatagaatcaggcggtatgcaa
agtttgaatgctaggttaaagcctgaaagatttgaagatttaatcgcggttttagcttta
tatagaccagggccacttgatagtgggatggtggatgattttatcgatatcaagcatggt
agaaaggctgcaacatatgcatttgatgatttaaagcctatacttgaaaatacttatggg
gttatagtttatcaagagcaggttatgcaaatagtgcaaaaaattggtggtttttctttg
ggtggagctgataatgtgcgtcgtgctatgggtaagaaaaaaagagaaattttggacaat
cttaaagcagagtatttagaaggagctaaaaaacaaggctatgatgagaaaaaggctgat
gatttgtttgagcttattttgaaatttgctgaatatggttttaataaatctcactcggct
gcctatgcgcttataacctttcaaacagcgtatttaaaaacttattatccaagtgaattt
atggctgcgcttttaacaagcgaagaaagcaatgtggataaggtcgcaaaatacattgaa
gagatgaaaagaatgaatatcaagcttttgccaccaagtgttaataaagctcaaagagaa
tttagtgcaactaaacttgaagatggttctgaagctatcatttatgggcttggagcgatt
aagagtgtgggaattcctgcgatagaaaatatcatgactattcgcaaggaagagggcttt
agtgattttgatgattttataagctctattgatcctactaagattaataaaaaaactata
gaaaatttagctaaatcaggtgcttttgatgagtttggttatactagaaaatgtttggtg
gataatcttgagcttatttcagaaacaagtagaaaaatagctgaagttaaaagaaattct
actgcttctctttttggagaagaagaaatagccgcagatatcaaagtagggcttcatgat
agcaaagtagaatttgagttaatggaaaaactaggctatgaaaaagaaatcttaggaatt
tatgtatcaggccatcctttggataaatttgcaagtcaaatagaaggtatagattatttt
aaaagtatggattttgaaacactcaaaggcgagggtgagcttttggttgtaggaaagatt
gaagattttaaatcaatgatgagtaaaagtggtaaaagatatgctaaggctgtggtttta
gacttttattcttcttttgatatgattatttttgaaactcaagtagaaaaagttgaaaca
ctttttaaagaaagcaaagatgaagcctttgcctttttactaagatataaaaacaatgac
aatgacttaagctttagtttaaatgaaatttatacactagaagaagcaaaagaaaatgag
ctaaaatcttttagtaagaaaaaaagctttgtaaaaaaagaaaacaaagaagattttaca
caagatcctatgaaatttgaagaaaatatcatagaacttgacattaataagcttagtaaa
gatatggtgtatgaaatttatgatctagctaatacaagacataatccgaaagatgctaat
aataaaaagcttgtgttaaaagtacttgatatgggtagctgcttgctttatcatacaaat
tttgttctctcgcaagaagctatggatgtgatagctcaaaaatgtaaaggttaa
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