Campylobacter lari RM2100: CLA_0161
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Entry
CLA_0161 CDS
T00858
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cla
Campylobacter lari RM2100
Brite
KEGG Orthology (KO) [BR:
cla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cla03032
]
CLA_0161 (topA)
03400 DNA repair and recombination proteins [BR:
cla03400
]
CLA_0161 (topA)
Enzymes [BR:
cla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CLA_0161 (topA)
DNA replication proteins [BR:
cla03032
]
Prokaryotic type
DNA Topoisomerases
CLA_0161 (topA)
DNA repair and recombination proteins [BR:
cla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CLA_0161 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
Toprim_4
RNA_POL_M_15KD
Toprim_2
DUF5795
DUF1272
DUF3653
TRAFD1-XIAF1_ZnF
Motif
Other DBs
NCBI-ProteinID:
ACM63524
UniProt:
B9KEN9
LinkDB
All DBs
Position
complement(138777..140864)
Genome browser
AA seq
695 aa
AA seq
DB search
MKNLIIVESPAKAKTIGNFLGKDYEVIASKGHIRDLPKSSFGIKIEDENFKPEYRISSDH
STLVKELKEKAKNAKQIYLATDEDREGEAIAYHIAKAINKDENSLPRIVFHEITKSAIEN
ALNNPRHLDINSVNAQQARRLLDRIVGYKLSPLLNQKIQKGLSAGRVQSAALKIIVDRER
EIKAFTPLKYFSIDVIFKKDLEAELVEFQGQKIEKFTITNEDRAKLIFENCKNAKFKINN
IESKDRKITPPPPFMTSTLQQSASNRLGFNPKKTMMIAQKLYEGVKTHQGIMGVITYMRT
DSLNIAKEALEQVRKLIKDEFGKEYLPAKANIYTTKAKGAQEAHEAIRPTNLSFTPKLAS
EFLEKDEARLYTLIYNRFLASQMNPAISQTQNVYAKSNEASFKISGRKILFDGHYKVYGD
MDKDKILPNLKLEDTLNIQNIEFNSHFTEPPSRYSEAGLVKKLENLGIGRPSTYAPTISL
LSARDYVRIDKKQLIPNEIAFNVIEVLEQNFSDIVDSDFTFKMEESLDEIAEGKLDWQEL
LREFYFPFMRKIDEGKKNIKSQKTITKIDETCPDCGGELAIRKGRYGEFIACLNFPKCKY
SRNLKQENKNEEKTQIKQVNSIGLTCPECKKGEIVERFSKRGKFYGCSAYPKCNFISKYK
PSEEKCEECGENLIIKELKKGTFLECLKCKIKKEI
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacttaataatagtagaatcacccgctaaggcaaaaactataggaaatttttta
ggaaaagattatgaagtaatagcttctaaaggtcatattagagatttgccaaaaagtagt
tttggtataaaaatagaagatgaaaatttcaaaccagaatatagaatttcaagcgatcat
tctactttagtaaaagaattaaaagaaaaagcaaaaaatgcaaaacaaatctatcttgca
accgatgaggatcgcgaaggagaagctatagcttatcacatagcaaaagctataaataaa
gatgaaaattcattacctaggatagtttttcatgaaattacaaaatcagctatagaaaat
gcactaaataatccaagacatcttgatataaatagcgttaatgcccaacaagctagacgc
ttgcttgatcgcattgtaggatataaattaagccctttgttaaatcaaaaaattcaaaaa
ggtcttagtgcaggccgtgttcaaagtgcggcattaaaaatcatagtagatagagaaaga
gaaattaaagcttttactcctttaaagtattttagtatcgatgtaatttttaaaaaagat
ttagaagctgaattggtagaatttcaaggccaaaaaatagaaaaatttaccataactaac
gaagatagagcaaaattaatctttgaaaattgcaaaaatgctaaatttaaaataaataat
atagaaagcaaagatagaaaaataaccccaccaccaccttttatgacttctactttgcaa
caaagcgctagcaatcgcttagggtttaaccctaaaaaaactatgatgatagctcaaaag
ctttatgagggcgtaaaaactcatcaaggcattatgggcgtgatcacttatatgagaact
gatagtttaaatatagctaaagaagcattagagcaagtaagaaaacttataaaagatgaa
tttggaaaagaatatttaccagctaaagcaaacatttatactacaaaagccaaaggcgct
caagaagcacatgaggctataagacctacgaatttaagctttactccaaaacttgcaagt
gagtttttagaaaaagatgaagcaagattatatactttaatatacaatcgcttcttagct
tcacaaatgaaccctgctatctctcaaactcaaaatgtctatgcaaaatcaaatgaagca
agttttaaaataagtggtagaaaaattttatttgatggacattataaagtatatggagat
atggataaagataaaattttacctaatttaaagctagaagatacattaaatatccaaaat
atagaattcaactcacattttaccgagccaccttctagatattctgaagctggacttgta
aaaaaacttgaaaatttaggcataggacgcccttctacttatgctccaactatttcttta
cttagcgcaagagattatgtgcgtatagataaaaaacaacttatcccaaatgaaatagca
tttaatgtaatagaagttttagaacaaaattttagcgatatagtagatagtgattttact
tttaaaatggaagaatctttagatgagatagcagaaggaaaacttgattggcaagagctt
ttaagagaattttactttccttttatgagaaaaattgatgagggtaaaaaaaatataaaa
agccaaaaaactattacaaaaatagatgaaacttgccctgattgtggtggcgagcttgct
ataagaaaaggaagatatggagaatttatagcatgtttaaattttccaaaatgtaaatat
tcaagaaatttaaaacaagaaaacaaaaatgaagaaaaaactcaaatcaaacaagtaaat
tcaataggattaacttgtccagagtgtaaaaaaggtgagatagtagagcgtttttctaag
cgtggtaaattttatggatgtagtgcttatccaaaatgtaattttataagcaaatacaag
ccgagtgaagaaaaatgcgaagaatgtggtgaaaatttaataattaaagaattaaaaaaa
ggcacatttttagaatgcttaaaatgtaaaatcaaaaaggaaatctaa
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