Cedecea lapagei: NCTC11466_00367
Help
Entry
NCTC11466_00367 CDS
T05810
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
clap
Cedecea lapagei
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clap03016
]
NCTC11466_00367 (truB)
Enzymes [BR:
clap01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCTC11466_00367 (truB)
Transfer RNA biogenesis [BR:
clap03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC11466_00367 (truB)
Prokaryotic type
NCTC11466_00367 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
VEB95264
UniProt:
A0A447UX28
LinkDB
All DBs
Position
1:356891..357835
Genome browser
AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGLSSNDALQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIAKLGQRTDTSDADGIVVQQRPVNFSAGQLAAALETFRGDTE
QVPSMYSALKHQGKPLYEYARAGIEVEREARPITVYELLFIRHEGDELELEVHCSKGTYI
RTIVDDLGEKLGCGAHVIFLRRLAVSKYPIERMVTLEQLNELVEQAHRQERAPADLLDPL
LMPMDSPASDFPLVNLLPEVAVYFKNGNPVRVAGVQAEGLVRVSEGEEQKFIGMGEIDDE
GRVAPRRLVVEYPL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgtgatattcacggtgtgctgttgctggataagccc
cagggcctctcttccaacgacgcactgcaaaaagtaaaacgcctttataacgcgaaccgc
gcaggccataccggtgcgctggatccgctggcgaccggcatgctgccgatctgcctcggt
gaagcgacaaagttctcccagtatctgctggactccgacaagcgttatcgcgtcatcgcc
aaacttgggcagcgcaccgatacgtctgatgccgacggcattgttgtccagcagcgcccg
gttaactttagcgccgggcagcttgccgccgcgctggagactttccgcggggataccgag
caggttccatcgatgtattcagcgcttaagcatcagggtaagcccctgtatgaatatgcg
cgtgcgggtattgaggttgaacgcgaagcccggccaatcacggtctatgaactgctgttt
attcgccatgaaggggacgagctggagctggaggttcactgctctaaagggacgtacatc
cgtacgatcgttgacgatctcggcgaaaaacttggctgcggtgcgcacgtgattttcctg
cgtcgtctggcggtcagtaaatatccgattgagcgcatggttacgctggaacagctcaat
gagctggttgagcaggcgcatcggcaggaaagagcgccagcagacctgctggatccgctg
ctaatgccaatggacagcccggcttcagatttcccgctggtgaacttgctgccggaggtt
gccgtctactttaaaaacggtaatccagttcgggtggctggcgtgcaggccgaaggactg
gtgcgcgttagcgaaggcgaagagcagaaatttattgggatgggtgaaatcgatgacgag
ggccgggttgctccgcgccgtctggttgtcgaatatcccctctga
DBGET
integrated database retrieval system
