Cedecea lapagei: NCTC11466_03594
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Entry
NCTC11466_03594 CDS
T05810
Symbol
appA_3
Name
(GenBank) Oligopeptide-binding protein AppA precursor
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
clap
Cedecea lapagei
Pathway
clap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC11466_03594 (appA_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clap02000
]
NCTC11466_03594 (appA_3)
Transporters [BR:
clap02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NCTC11466_03594 (appA_3)
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
VEC00364
UniProt:
A0A3S4MG86
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All DBs
Position
1:3573716..3575419
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AA seq
567 aa
AA seq
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MARLLDALQTKPTRFRLALRAALISSVVVFSGAAAADEILKEGITPATDASQIPATAKLR
KDTVVAGISEPQGIFNPYFFVNGWDENVTNVIFSRLIDWDSHGNLVPGLAESWKVSPDGK
VYTIKLRPGLTFSDGSPLTAEDVAFTLTVLYDPKYDGDTDITLANVAGGADYKAGKADSV
SGLKVIDPLTLQVTTTQPGATTLGKIGGPVLSKAYYGKGYQRGNLDYLRTLHGKPLGNGP
YVYEKYIPGQEIRFHANTHFYRGTPPTPRFIYRVTNPSTNFQLFQTGETDYDSFTSRPDD
IEQLKLLGFANINLYGSSDYSKVEFNVRRPALRDVKVRQALIYGLDRQKLIDVVYQGYGT
VANEPISPISWAYNAEGVNPYKYDPAQAKKLLDDAGWKPGPDGIRVKDGKRLELTLLVSK
KVLNDALIPIAKENWQQIGVLLKPQVVDFNALMAQRKAGNYDLASFSTSTLNDPHDGVWD
YYSTEAKESGYNNPQVDKLINEGNATLDEEKRKTIYHELYKVLAADPPVILLGNRKILSA
SSARVTGFKPDVYNGLTGSLPDVKIVK
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
ttggccaggttacttgacgcattacaaacaaaacccacgcgctttcgcctggccttacgg
gcagccctgattagcagcgtggtggttttctccggcgcggcggcagccgacgaaatctta
aaggaaggcatcacgccggccaccgacgcaagccagatcccagccaccgctaagctgcgc
aaagacacggtggtggccggaatttctgagccgcagggtatctttaacccctatttcttc
gttaacggctgggatgaaaacgtcaccaacgtcatcttctcgcgactgattgactgggac
agccacggtaacctggtgccgggcctcgccgaaagctggaaagtcagcccggacggcaag
gtctacaccatcaaactgcgccctggcctgacctttagcgacggctccccgctgaccgcc
gaagatgtcgcgttcacgctcaccgtgttgtatgacccgaaatatgacggcgataccgac
attacgcttgccaacgtcgccggcggcgcggattacaaagccggtaaagccgacagcgtc
agcggcctgaaggttatcgatccgctcacgctgcaggtcaccaccacgcagccgggggcc
actacgctcggcaagattggcggcccggtgctgtcgaaggcgtactacggcaaaggctac
cagcgcggcaacctggattacctgcgcaccctgcacggcaaaccgcttggcaatggccca
tacgtttatgagaagtacattccgggccaggaaatccgcttccacgccaacacccatttc
taccgcggcacgccgccaacgccgcgctttatctaccgcgtaactaacccgtccactaac
ttccagctgttccagaccggcgagacggattacgactcatttacttcacgtccggacgat
atcgaacagctgaaactgctgggcttcgccaatatcaacctgtatggctccagcgactac
agcaaggttgagttcaacgttcgccgcccggcgctgcgggatgtaaaagtgcgccaggcg
ctgatctacggcctggatcgccagaagctgatcgacgtggtttaccagggctacggcacc
gtggctaacgaaccgatctcgccgatctcctgggcctataatgcggaaggcgtgaacccg
tataaatacgatccggcgcaggcgaaaaagctgctggacgacgcgggctggaaaccgggc
cccgacggcatccgcgtgaaggacggcaaacgtctggagctgacgctgctggtcagcaaa
aaggtgctgaacgacgcgctgatccctatcgccaaagagaactggcagcagatcggcgtg
ctgcttaagccgcaggtcgtcgacttcaatgccctgatggcgcagcgcaaagcgggcaac
tacgatctggcctccttcagcaccagcacgctgaacgatccgcacgacggcgtctgggat
tattacagcaccgaagccaaagagtccggctataacaatccgcaggtggacaagctgatc
aacgagggcaacgccacgctcgatgaagagaagcgcaagaccatctaccacgagctgtat
aaagtgctggctgcggatcccccggtgattctgctcggcaaccgcaaaattctgtccgcc
agcagcgcccgcgtcaccggctttaagccagacgtgtacaacggcctgaccggcagcctg
ccggatgtgaaaatcgttaagtaa
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