Caldicellulosiruptor acetigenus 6A: Calla_2011
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Entry
Calla_2011 CDS
T01600
Name
(GenBank) transcriptional regulator, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
clc
Caldicellulosiruptor acetigenus 6A
Brite
KEGG Orthology (KO) [BR:
clc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clc03000
]
Calla_2011
Transcription factors [BR:
clc03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Calla_2011
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_3
HTH_23
HTH_24
MarR_2
HTH_AraC
HTH_38
HTH_11
HTH_Tnp_ISL3
HTH_10
HTH_IclR
HTH_28
HTH_Crp_2
HTH_29
MarR
HTH_5
HTH_19
HTH_36
Sigma70_r4_2
HTH_7
HTH_AsnC-type
HTH_26
Fe_dep_repress
HTH_31
Sigma54_DBD
Sigma70_r4
Crp
HTH_8
HTH_50
Sigma70_r3
TetR_N
Phage_terminase
HTH_17
MerR
TnsD
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
AEM74579
UniProt:
G2PVH9
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Position
complement(2103716..2104735)
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AA seq
339 aa
AA seq
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MRKNKNVTIKDIAKALGLSPSTVSRALNNYSDISPETRDKVIEMAKKLNYTPNIFAKSLV
TNKTKRVGLFIEDMEKEGIYGVFYYEILISFRKAAMDNGYEVVLLSTSSEEQKRISFDAV
MQEKGLEGAFIMGLKMDDEYLNEIQKSTYPVVLLDIPIKNSNVGYVTTNNLKGAQLATEH
LINLGHKKIGFLNGHKKAYVSQERLNGYILALSKNGLQVDSELIYEGDFTEASGFKAADY
FVQKGVTAVFAASDMMAIGLIKRLKELGVDVPKKVSVVGFDDISLARYITPTLTTIRQNK
SEMGKSAFYLLLNLISKQPINHIILEPELVKRESTARLR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagaacaagaatgtgaccataaaagatattgcaaaagctttgggactgtcgcca
agtactgtttcaagggcgctcaataattactcagatataagcccggagacaagagacaag
gtaatagagatggccaaaaaactaaactacacaccaaatatctttgcaaaaagtcttgtt
acaaacaaaacaaaaagagttggactgttcattgaagacatggagaaagaaggtatatac
ggtgttttctattatgagatacttataagctttaggaaagctgcaatggacaatggttat
gaggttgttttgctttcaacatcttcagaggagcaaaaaagaatctcttttgatgcggtt
atgcaagaaaaagggcttgaaggcgcatttatcatgggacttaaaatggatgatgagtat
ctaaatgaaatacaaaaaagtacctatcctgttgtattgcttgacattccaataaaaaac
tcaaatgtaggttatgtgacgacaaacaatctaaaaggtgcgcagcttgcaacagaacac
ttgattaaccttggacacaaaaaaatagggtttttgaatggtcacaaaaaagcatatgtc
agccaagaaagattgaacggttatatattggcactgagcaaaaacggtcttcaggttgac
agtgaacttatttatgaaggtgattttacagaggcaagtgggtttaaagcagcagactat
tttgtccagaaaggtgtcacagcagtgtttgctgcatcagacatgatggcaatcggtctt
ataaaaagattaaaggaacttggtgtggatgtgcctaaaaaagtttcggttgttggattt
gacgatatatccttggcacgctatatcacccccactcttacaacaataagacaaaacaag
agtgagatgggcaaatcagccttttacttgcttttgaacctgatttcaaagcagcccata
aaccacattattttagagccagagcttgtaaaaagagaatcaacagcaagactgcgctaa
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