Clostridium ljungdahlii: CLJU_c12960
Help
Entry
CLJU_c12960 CDS
T01276
Name
(GenBank) predicted ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
clj
Clostridium ljungdahlii
Pathway
clj03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
clj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLJU_c12960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clj03032
]
CLJU_c12960
Enzymes [BR:
clj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
CLJU_c12960
DNA replication proteins [BR:
clj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
CLJU_c12960
Elongation factors (archaeal)
CLJU_c12960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
DUF1854
DUF61
Motif
Other DBs
NCBI-ProteinID:
ADK14364
UniProt:
D8GS11
LinkDB
All DBs
Position
1393197..1394054
Genome browser
AA seq
285 aa
AA seq
DB search
MEDSESVDFDINKENFSWNELENFKFDKIKYAIKNLEEGYFDLNEDEIKKVIGNLKLDKR
KNVRSLSSSFYKFILNKNSEISRVRKMYEFDKSFGNHIYTAGVDEVGRGPLAGPIAAGAV
ILNLNYNEDRELILGIKDSKKLTPKRRCELAKVIKERALAYNIAVINNIEIDKRGISWCN
NEVLKRAVEGLKLPVTMALSDGYAVKNLSTNNEFVIKGDTKSASIAAASIIAKVYRDSLM
EEYSHLYTNYKFEQNSGYGTKDHIESIKKYGICKIHRVSFLKNIL
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggaagatagcgaaagtgtagattttgatataaataaagaaaatttttcgtggaatgaa
ctagaaaattttaaattcgataaaataaagtatgcaataaaaaatttagaagaaggctat
tttgacttaaatgaggatgaaatcaaaaaagttataggaaatttaaagttagacaaaaga
aaaaatgtaaggtcgttgtcttcaagtttttacaaattcattttaaataaaaattcagag
atttccagagtaagaaaaatgtatgaatttgataagtcttttggaaatcatatatataca
gctggtgtagatgaagttggaagggggcctttggcaggtccaatagctgctggggcagtg
atacttaatttgaattataatgaagatagagaattaattttaggtataaaggattctaaa
aagcttacgccaaaacgtagatgtgagcttgcaaaggttataaaagaaagggcgcttgct
tataatattgcggttataaacaatattgaaatagataagaggggaatatcctggtgtaat
aatgaagtactaaagagagcagtagaaggtctcaaattacctgtaaccatggcattatct
gatgggtatgcagtaaaaaacttgtccactaataatgagtttgtaataaaaggtgatacg
aagagtgctagtatagctgcagcttcaattattgcgaaagtatacagggatagtctcatg
gaagaatactctcatctgtatacaaattataagtttgaacaaaattctggatatggaact
aaagatcatatagaatctataaaaaaatatggaatttgtaaaatacatagagtaagtttt
ttaaaaaatatattgtag
DBGET
integrated database retrieval system