Clostridium ljungdahlii: CLJU_c20280
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Entry
CLJU_c20280 CDS
T01276
Name
(GenBank) predicted penicillin binding protein, transpeptidase domain
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
clj
Clostridium ljungdahlii
Pathway
clj00550
Peptidoglycan biosynthesis
clj01100
Metabolic pathways
clj01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
clj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CLJU_c20280
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CLJU_c20280
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
clj01011
]
CLJU_c20280
Enzymes [BR:
clj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CLJU_c20280
Peptidoglycan biosynthesis and degradation proteins [BR:
clj01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CLJU_c20280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ADK15090
UniProt:
D8GJ15
LinkDB
All DBs
Position
2200597..2203242
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AA seq
881 aa
AA seq
DB search
MNEKKRFSITRYTILIAIMIIIFSTIIIRLFFLQVVQGAEYKEKASNKSIKEISDIAPRG
QILDSKGNILAASTQGYMLIYNQTDNQDKVFFSTMNKVFKILDDSGESQQDDFELKVNPY
RFEFRSDDEDTRKNLEIKFKRDRGLNEELEKNIKKKSKNIPDDELKVQVNKELLNMSPED
TFKKLMKRYGISNTYPLEQQRRLMIVKDTLKMNSFSGYKPVIVASNIKKETAFKFLQILN
ELPGMDVTTEPIRSYPNGDLGSNFLGYISKISSSYERYTEKGYNVNSDYVGQAGIEGALE
DRLKGSKGGRIVKLDKNGKITEELGKKESCPGQTVQLTIDTNVQKAAENSLESTLAYLRS
NPNEQQGSNTSNATRGEAVAVNVNTGAIIAMAQVPRYDPNLFTVPGKLSSEMYDEYFNPN
LEQFGRKYIETRGITANYPGESEDEVLNELFPIDKSIKNNSTIRKDVYDIYPKPFYNYAT
QSLIPPGSTFKPITAIAGLETGVITPDFTVDDQGKFDQGGKIVEFKSDGPQGVVNLISAI
EKSSNPYFMTVAEKLRNALGDNILAKYAWKFGLGIDPNSSVKAATGIEIPEKFGQVYNTV
SNKTAYASTYLWKTMSVLKNGQDDYGHKIVTIDLYDNDNDSKETTQIKNYIKNLIKDCIK
NGTSSFDKSKYKELFSELTSKDVNNKRDISDSQMNSLINEIYSITISDANAQLKVPANIE
DAAIGQGLNQFTPLQIVNYVATLANGGTRYKLHLVDQYLDTDGKVIEKIKPEVMKKTGVS
AANLESVKEGMNAVNENGTAAHVFNGFPKSTAGKTGTAQSLGNQEQVGRTDYAEYIGFAP
SDKPEIAVCVVLFDGGHGGVGAASVAKDIYSSYFNINNKIK
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaagaaaagatttagtattacaagatatactattcttatagcaattatgata
attattttttccacaataatcataaggcttttttttcttcaagtagtgcaaggcgctgag
tacaaggaaaaggcaagtaataaatctataaaagaaatttcagacatagctccaagagga
caaattttggattctaagggcaatattttagctgccagtacccagggatacatgttgata
tataatcaaactgataatcaggataaagttttttttagtactatgaataaggtatttaaa
atattggatgacagtggcgaaagtcagcaggatgattttgaactaaaagtgaatccttat
agatttgaatttagaagtgatgatgaggatacaagaaaaaatcttgaaatcaagttcaaa
agagatcggggattaaatgaggaattagaaaaaaatatcaagaaaaaaagcaagaatata
cctgatgatgaacttaaagtgcaggttaataaagaacttttgaatatgtctccagaggat
accttcaaaaagcttatgaaacgatatggtataagtaatacttatcctctagaacaacag
agaaggctcatgattgtgaaagacaccttaaaaatgaatagcttttcagggtataaacct
gttattgtggctagcaatataaaaaaagaaactgcctttaaatttttgcaaatattaaat
gaactcccaggaatggatgtgaccacagaacctataagatcttatccaaatggagattta
ggatcaaactttttagggtatatatcaaaaatatcttctagttatgaaagatatacagaa
aaaggatataatgtaaatagtgattacgtagggcaagcaggaattgaaggagctcttgaa
gacagactaaaaggatcaaagggtggaaggatagtaaagctagataaaaatggaaaaata
actgaagaacttggaaaaaaggaatcgtgtcctggacagacagtacagcttactatagat
acaaatgtacaaaaagcagcagaaaattcccttgaaagtactttggcatatcttaggagt
aatcctaatgagcagcaaggatcaaatacttcaaatgccacaagaggagaagctgtcgca
gtaaatgtaaatacgggagcaataatagcaatggctcaggtacccagatatgatccaaat
ttgtttacagtaccaggaaaattgtcttcagaaatgtatgatgaatattttaaccctaat
ttagaacagtttggtagaaaatatattgaaacacgaggaattacagctaattatccagga
gaaagtgaggatgaagtactaaatgaacttttcccaattgataagagcataaagaataat
agcactataagaaaagatgtatatgatatatatccaaaacctttttataattatgctact
caatctcttattcctccaggttctacttttaaacccataactgctattgcaggtcttgaa
actggagtcataactccagattttactgtagatgatcaaggaaaatttgatcagggagga
aaaatagtagagtttaagtcggatggccctcaaggagttgtaaatcttataagtgccata
gagaaatccagtaacccctatttcatgacagtggcagaaaagcttagaaatgcgttggga
gataatattctggcaaaatatgcatggaagtttggattgggtatagatccaaacagcagt
gttaaagctgctacgggaatagaaataccagaaaagtttgggcaggtatataatactgtg
tcgaataaaactgcttatgctagtacttatctttggaaaactatgtctgtacttaaaaat
gggcaagatgactacggacacaaaattgttacaatagatttatatgataacgataatgat
tcaaaagaaacaacacaaattaaaaattatattaaaaatcttataaaagattgtataaaa
aatggaactagttcttttgacaaatcaaaatataaggaattattttcagaacttacatca
aaggatgttaataataaaagggatataagtgacagccaaatgaatagtttaatcaatgaa
atatatagtattactatttcagatgccaatgcacaactaaaagtacctgcaaatatagaa
gatgctgctataggtcaaggattaaatcaatttacgcctcttcaaatagtgaattatgtt
gcaactcttgcaaatggaggtactagatataaactccacttggtagatcaatatctagat
acagatggcaaagtaattgaaaaaatcaagccagaggttatgaaaaaaactggtgtcagt
gctgcaaatttggaatctgtcaaagaaggaatgaatgccgttaatgaaaatggtacagca
gctcatgtatttaacggattcccaaaaagtacagcaggtaaaacaggtactgctcaaagt
cttggtaatcaagaacaagttggaagaacggactatgcagagtatataggatttgctcct
agtgataaaccggaaatagcagtatgtgtggttttattcgatggtggccacggaggagtt
ggtgcagcttctgtagctaaagatatttattcttcatactttaatataaataataaaatt
aaatga
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