Campylobacter lari RM16712: UPTC16712_0056
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Entry
UPTC16712_0056 CDS
T03556
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III (exonuclease III)
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
clm
Campylobacter lari RM16712
Pathway
clm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UPTC16712_0056 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clm03400
]
UPTC16712_0056 (xth)
Enzymes [BR:
clm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
UPTC16712_0056 (xth)
DNA repair and recombination proteins [BR:
clm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
UPTC16712_0056 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AJD05606
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All DBs
Position
55576..56334
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AA seq
252 aa
AA seq
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MKLLSWNVNGLRAICDKNALDWIEKEEIDFIGFQEIKAHEDKFPKRIYEYPFKHMYSNSA
KRAGYSGVMSLCNFDSEVKKCEFFDDDEGRVLEHSFKNVVLFNIYFPNGQKDEERLNFKM
KFYNDFLVYLDKLLKEGKEIIICGDVNTAHREIDLTHPKANEKTSGFLPIERAWIDDLLK
LGFIDTFRHINGDIKEKYSWWSYRMKARERNVGWRIDYFFISNGLKDKLKNAFIRDDIFG
SDHAPVGIEIDI
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaaattattatcatggaatgtaaatggtctaagggcaatttgtgataaaaatgcactt
gattggattgaaaaagaagaaatcgattttataggttttcaagaaatcaaagcacacgag
gataaatttccaaaaagaatttatgagtatccttttaaacatatgtattcaaatagtgct
aaaagagcaggatattcaggtgtaatgagtttgtgtaattttgatagtgaagtcaaaaaa
tgtgaattttttgatgatgatgagggtagggttttagaacatagctttaaaaatgtagtt
ttgtttaatatctactttccaaatggtcaaaaagatgaagagcgtttgaactttaaaatg
aaattttataatgattttttagtgtatttagataagcttttaaaagaaggtaaagaaatc
attatctgcggagatgtaaatactgctcaccgtgagatagacttaacccacccaaaagct
aatgaaaaaacttcaggttttttaccgattgagcgtgcttggatagatgatttgctaaaa
ttaggctttattgatacttttagacatataaatggcgatattaaagaaaagtattcgtgg
tggagctatagaatgaaggcaagagaaagaaatgtaggttggaggattgattattttttc
atttctaatggcttaaaagataagctcaaaaatgccttcataagagatgatatttttggt
tcagatcatgctcctgtaggaatagaaatagatatctaa
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