Campylobacter lari RM16712: UPTC16712_0637
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Entry
UPTC16712_0637 CDS
T03556
Symbol
msbA
Name
(GenBank) lipid A export ATP-binding/permease protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
clm
Campylobacter lari RM16712
Pathway
clm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
clm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
UPTC16712_0637 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clm02000
]
UPTC16712_0637 (msbA)
Enzymes [BR:
clm01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
UPTC16712_0637 (msbA)
Transporters [BR:
clm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
UPTC16712_0637 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
SbcC_Walker_B
AAA_22
AAA_16
DEAD
AAA_29
Trm56
Motif
Other DBs
NCBI-ProteinID:
AJD06151
LinkDB
All DBs
Position
complement(609963..611726)
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AA seq
587 aa
AA seq
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MDKNYKEMKLKEVFTRFKPYYKDYWFYFVLAIIGMLLTSGGTAASAYIIEPILNKIFIEK
NVDLLYYMPLLVVLIYALKNLGAYMQVYYISYVGTDILRRLRELVLGNLLRLDMSFFHKY
RSGELISRCTSDIGALQNIVSTIIPEILRESLTAIGLLSVVIYQSPKLAFFALVILPLAI
YPLAIFAKKIKKIGRNTQEKNSDLTSRLSEIFSNIELIKASNASKNEMQKFSQTNSEVCK
LSLKGIRIEALSSPLMESMGSIGFAIVIIIGGKEVIDGSLSIGSFFSFTTALFMAYTPIK
RLSSLYTRLQNAVAASERTFYLTDLEPQIKGGDEKLTENIQNIHFKNVSLSYQKDKMVLK
DVNFSFNKGEILALVGSSGGGKSSIINLLMYFFEKDSGAILINQKDISSFDIVSLRENIS
LVTQNIYIFNDTIAQNIAYAKEYDEARVIEVLKQANAYDFVQELGGIHTELKEHGKNLSG
GQKQRIAIARALYKNPQILIFDEATSALDNESEKAIVKTIESLKKDRLILIIAHRLSTIE
NADKIAVLDKGKIASIGNDAYLMQHCEIYQKLKQKVQKTDKDKENEN
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaattacaaagaaatgaagcttaaagaggtatttactcgctttaagccttat
tataaagattattggttttattttgttttagctattataggtatgcttttaactagtggc
ggaacagctgctagtgcatacatcatagagcctattttaaataaaatttttatagaaaaa
aatgttgatttgctttactatatgcctttacttgttgttttaatttatgctttaaaaaat
cttggcgcttatatgcaagtttattatatatcttatgttgggacagatattttaagaaga
ttaagagaattagttcttggtaatcttttgcgcttagatatgagcttttttcataaatac
agaagtggagaattaatcagcaggtgcacttctgatattggagctttacaaaatatagtt
tctactatcatacctgaaattttaagagaaagtttaactgccattggacttttaagtgta
gtgatttatcaaagtccaaaacttgctttttttgctttagttattttacctttagcaatt
taccctcttgctatttttgctaagaaaatcaaaaaaataggacgcaatacccaagaaaaa
aattccgatcttacttcaagattgagtgaaattttttctaatatagaacttatcaaagct
tctaatgcaagtaaaaatgaaatgcaaaaattcagccaaactaatagcgaagtttgcaag
ctttccttaaaaggcattagaattgaagctttaagtagccctttaatggaatctatgggt
tcaattggttttgcaatagtaattataataggtggtaaagaagtaattgatggaagttta
agtataggttctttttttagctttactacagctttatttatggcttatactcctattaaa
agactttcttcactttatacaagattgcaaaatgcagtagcagctagtgagagaactttt
tatctaactgatttagaaccacaaattaaaggtggcgatgaaaaacttacagaaaatatc
caaaacatccattttaaaaatgtctctttaagctatcaaaaagataaaatggtattaaaa
gatgtaaatttttcttttaataaaggagaaattctagccttagttggatcaagtggtgga
ggaaaatcttctattattaatcttttaatgtatttttttgaaaaagatagtggtgcaatt
ttaatcaatcaaaaagatattagttcttttgatattgttagcttaagagagaatatctct
ttggtaactcaaaatatttatatatttaatgacactatagctcaaaatatagcttatgct
aaagaatacgatgaagcacgtgtaatagaggttttaaaacaagctaatgcttatgatttt
gttcaagagcttggcggtatacatactgaattaaaagagcatgggaaaaatctctcaggt
gggcaaaaacaacgcattgctatagcaagggctttatataaaaatcctcaaattttaatt
tttgatgaagcaacctcagcacttgataatgaaagtgaaaaagccatagtaaaaactata
gaaagcttaaaaaaggatcgtttgatactcatcatcgctcatagacttagcactatagaa
aatgccgataaaattgctgtacttgataaaggaaaaatagcttctataggaaatgatgct
tatttaatgcaacattgtgaaatttatcaaaaattaaaacaaaaagtacaaaaaactgat
aaagataaagaaaatgaaaactaa
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