Campylobacter lari CCUG 22395: UPTC4110_0401
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Entry
UPTC4110_0401 CDS
T03551
Symbol
truD
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
clq
Campylobacter lari CCUG 22395
Brite
KEGG Orthology (KO) [BR:
clq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clq03016
]
UPTC4110_0401 (truD)
Enzymes [BR:
clq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
UPTC4110_0401 (truD)
Transfer RNA biogenesis [BR:
clq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
UPTC4110_0401 (truD)
Prokaryotic type
UPTC4110_0401 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF2732
Motif
Other DBs
NCBI-ProteinID:
AJD02983
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All DBs
Position
372154..373278
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AA seq
374 aa
AA seq
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MEENIIFKPLYTLKHSPIDVYFSKNSNDFVVREKPLYEFSGKGEHLILHIQKKDLSTSEA
LRILSEQSGVKMKDFGYSGLKDKQGLTFQYISMPKKFEESLRNFKHDKMKILETFYHDNK
LRIGHLKGNSFFIRLKKVSKVDALKIEQAFKNIQKQGFANYFGYQRFGKFQDNFSQGLEI
LKGKKIKNKKMQEFLISAFQSELFNRYLSKRVELSHFINDFSEKEIKQIYGLEKEEIKSL
KNQTQFFKLLKGEVLGHYPFGKCFICEDLSSELERFNQKDISAMGLLIGSKAYEANEGLA
KKLEDEIFSFAYEFKDKMQGSRRFMWSYLQDCKSYYDEEKAHFTLEFFLQKGSYATVVLE
EILHTDIFEQTHNI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaacatcatttttaaacccttatatactttaaaacatagcccgatagatgtg
tatttttcaaaaaatagcaatgattttgtagtaagagaaaagcctttgtatgaatttagc
ggcaaaggtgaacatttaattttgcatatacaaaaaaaagatcttagtactagcgaagct
ttgagaattttaagcgagcaaagcggtgttaaaatgaaagattttggctatagcggttta
aaagataaacaaggtttaacttttcaatatatttctatgcctaaaaaatttgaagagagc
ttaagaaattttaaacatgataagatgaaaattttagaaactttttatcatgataataaa
cttagaatagggcatttaaaaggaaattcattttttataagattaaaaaaagtttcaaaa
gtagatgctttaaaaatagaacaagcttttaaaaatatccaaaaacaaggttttgctaat
tattttggatatcaacgttttggcaaatttcaagataatttttcacaaggactagaaatt
ttaaaaggcaaaaaaatcaaaaataaaaaaatgcaagaatttttaatttctgcttttcaa
agcgagctttttaatagatatttgagcaaaagggtggaattgtcacattttattaatgac
tttagtgaaaaagaaataaaacaaatttatggtttagaaaaagaagaaatcaaaagttta
aaaaatcaaacacagttttttaagcttttaaagggcgaagttttaggacattatcctttt
ggtaaatgttttatatgtgaagatttatcaagtgaattagaaagatttaatcaaaaagat
attagcgcaatgggtcttttaataggctctaaagcttatgaagcaaatgaaggtctagct
aaaaaattagaagatgagattttttcttttgcatatgagtttaaagataaaatgcaaggt
tcaaggcgctttatgtggtcttatttacaagattgtaaaagttattatgatgaagaaaaa
gctcattttactttggagtttttcttgcaaaaaggctcgtatgccacggtagttctggag
gaaattttgcacacagacatctttgaacaaacacataatatataa
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