Campylobacter lari RM16701: UPTC16701_0003
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Entry
UPTC16701_0003 CDS
T03550
Symbol
gyrB
Name
(GenBank) DNA gyrase, subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
clr
Campylobacter lari RM16701
Brite
KEGG Orthology (KO) [BR:
clr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clr03032
]
UPTC16701_0003 (gyrB)
03400 DNA repair and recombination proteins [BR:
clr03400
]
UPTC16701_0003 (gyrB)
Enzymes [BR:
clr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
UPTC16701_0003 (gyrB)
DNA replication proteins [BR:
clr03032
]
Prokaryotic type
DNA Topoisomerases
UPTC16701_0003 (gyrB)
DNA repair and recombination proteins [BR:
clr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UPTC16701_0003 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AJD04078
LinkDB
All DBs
Position
2539..4857
Genome browser
AA seq
772 aa
AA seq
DB search
MQENQNYGAGNIKVLKGLEAVRKRPGMYIGDTNIGGLHHMIYEVVDNSIDEAMAGFCDTI
NVEITTEGSCIVSDNGRGIPVGIHPTENIPTLTVVLTVLHAGGKFDKDTYKVSGGLHGVG
VSVVNALSKKLVATVHRDGEIYRQEFSEGKVTSNFETIGKSKKTGTIIEFWPDDQIFEVT
DFDYEILAKRFRELAYLNPKITINFKDNRVGKAESFHFEGGISQFVTDLNKKQALTKAIF
FNVDEEDVNVEVALLYNDSYSENLLSFVNNIKTPDGGTHEAGFRMGLTRVISNYIEANAS
AREKDSKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIVSKASFEYLTKYFE
ENPIEAKAIMNKALMAARGREAAKKARELTRKKESSSVGTLPGKLADCQSKDPNESEIYL
VEGDSAGGSAKQGRERTFQAILPLRGKILNVEKARLDKILKSEQIQNMITAFGCGIGDEF
DIEKLRYHKIIIMTDADVDGSHIQTLLLTFFFRFMNDLVTNGHIYLAQPPLYRYKKGQKK
EIYLKDEKALNDYLIETGIESSTYEGIGLNDLKDFLKIVAAYRSVLKELEKRFNVISVIR
YLIENPDLIKASNEELFKVIKEFLEKQNHNILNSYINENEIRVYVQTENGLEELIINDDL
FANPLYEEANYIYQKIKDRDLKFDKDILEILDEVEKNAKKGAYIQRYKGLGEMNPEQLWE
TTMDPSNRRLLKITIEDAQRANDTFNLFMGDDVEPRREYIQAHAKDVKHLDV
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaatcaaaattatggtgcaggaaatattaaagttttaaaaggcttagaagct
gttagaaaacgccctggtatgtacataggtgataccaatataggcggtcttcatcatatg
atttatgaagtagtagataattctatcgatgaagctatggcaggtttttgtgatacgatt
aatgtagaaatcaccacagaaggttcttgtatagtaagtgataatggtagaggaattcct
gtaggaattcaccctactgaaaatattcctactttaactgtagttttaaccgtacttcat
gcaggtggaaaatttgataaagatacttataaagtttcaggtggtttacacggggttggt
gtgagcgttgtaaatgctttatcaaaaaaattagttgctacagtacatagagatggagaa
atttatcgccaagaattttcagaaggtaaagtcacaagtaattttgaaaccataggtaaa
agtaaaaaaacaggaacaatcatagaattttggccagatgatcaaatttttgaagtgact
gattttgattatgaaattttagctaaaagatttcgtgaacttgcatatttaaatccaaaa
attactataaattttaaagataaccgcgtaggaaaagcagaaagttttcattttgaaggt
ggtataagccagtttgttacagatttaaataaaaaacaagctttaactaaggcaatattt
ttcaatgtagatgaagaagatgtaaatgttgaagtagcattgctttataatgatagttat
agtgaaaatttactttcttttgtaaataatattaaaactccagatggtggaacgcacgaa
gcaggttttagaatgggcttaactcgtgttataagtaattacattgaagcaaatgctagt
gctagagagaaagactctaaaatcacaggtgatgatgtaagagaaggtttgatagcagtt
gtaagtgtaaaagtacctgagccacaatttgagggacaaactaaaggaaaattaggttca
agttatgttagacctatagtttctaaggcttcttttgagtatttgacaaaatattttgaa
gaaaatcctatcgaagcaaaagctatcatgaataaagctttaatggctgctcgtggtaga
gaagcagctaaaaaagctagagagctaacaagaaaaaaagaaagttcaagtgtagggact
ttaccaggaaaattagctgattgtcaaagtaaagatccaaatgaaagtgaaatttactta
gttgagggtgatagtgcgggaggttctgcaaaacaaggtagagaaagaactttccaagcg
attttacctttaagaggtaaaatactcaatgttgaaaaagcaagactagataaaatttta
aaaagtgaacaaattcaaaatatgatcacagcctttggttgtgggatcggtgatgagttt
gatatagaaaaattaagatatcataaaatcatcatcatgaccgatgctgatgtagatggt
tctcacatacaaactttacttttgacatttttcttccgttttatgaatgatcttgtaaca
aatggacatatttatttagctcaaccacctttatatcgctacaaaaaaggacagaaaaaa
gaaatttatctaaaagatgaaaaagctttaaatgattatttgatcgaaacaggtatagag
agttctacttatgagggcataggattaaatgatttaaaagattttctaaaaattgttgca
gcttatagaagtgttttaaaagaattagaaaaaagatttaatgtaatttcagtgattaga
tatttgatagaaaatcctgatttgataaaagcttctaatgaagaattatttaaagtcata
aaagaatttttagaaaaacaaaatcacaatatcttaaattcatacatcaatgaaaatgaa
attcgtgtttatgtgcaaactgaaaatggtttagaagagcttatcatcaatgatgattta
tttgctaatcctttatatgaagaggcaaattatatttatcaaaaaatcaaagatagagat
ttaaaatttgataaagatattttagaaattttagatgaagttgaaaaaaatgctaaaaaa
ggtgcttatatacaacgctataaaggtcttggtgagatgaatcctgaacaactttgggaa
acaactatggatccgagtaatcgtcgtttgttaaagatcaccatagaagatgctcaaaga
gcaaatgatactttcaaccttttcatgggtgatgatgtagaaccacgccgtgagtatata
caagctcatgctaaagatgttaaacatttggatgtttaa
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