KEGG   Clostridium bornimense: CM240_0020
Entry
CM240_0020        CDS       T03165                                 
Symbol
serS
Name
(GenBank) Serine-tRNA ligase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
clt  Clostridium bornimense
Pathway
clt00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:clt00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CM240_0020 (serS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:clt01007]
    CM240_0020 (serS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:clt03016]
    CM240_0020 (serS)
Enzymes [BR:clt01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     CM240_0020 (serS)
Amino acid related enzymes [BR:clt01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   CM240_0020 (serS)
Transfer RNA biogenesis [BR:clt03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    CM240_0020 (serS)
 Prokaryotic type
    CM240_0020 (serS)
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N NPV_P10 LPP FapA POTRA KASH_CCD Uso1_p115_C
Other DBs
NCBI-ProteinID: CDM67213
UniProt: W6RSJ2
LinkDB
Position
rep1:22814..24091
AA seq 425 aa
MLDLKRIRTDAEEVKRALGNRGEDFDVSIIDKIVELDEERRKILVEVEALKSKRNADSAK
VPALKKAGEPVDEIFAEMKKISEEIKGLDEKVSKISEEIDYHMLRIPNIPNPSVPDGASD
EDNVEIRKWGEPRKFDFEAKAHWDIGTGLDILDFERAGKVTGSRFTFYKGLGARLERAII
NYFLDTHTEKGYVEVLPPYMANRASMTGTGQLPKFEEDAFKVENNGYFLIPTAEVPVTNM
YRDEIISGDKLPIKHVAYSACFRAEAGSAGRDTRGLVRQHQFNKVELVKFTKPEDSYDEL
DKLTADAEAVLQGLGLPYRVVRICKGDLGFTAALKFDIEVWMPSYNRYVEISSCSNFEDF
QARRANIKYKEDPKSKAQFVHTLNGSGVAIGRTVAAILENFQNEDGTVTIPEALKPYMGG
RDIIK
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgttagatttaaaaagaataagaactgatgcagaggaagtaaaaagagcgttaggaaac
agaggagaagattttgacgtctctattattgataaaatagttgaattagatgaagaaaga
agaaaaatactagttgaagttgaagcattaaagagtaagagaaatgctgattcagcaaag
gttccggcattaaagaaagcaggagaaccagtagatgaaatatttgcagaaatgaagaaa
atttcagaagaaataaaaggattagatgaaaaggtatcaaagattagtgaagaaatagat
tatcatatgcttagaatacctaatataccaaatccatcagttccagatggggcttctgat
gaagacaatgtagaaattagaaaatggggagaacctagaaaatttgattttgaagcaaag
gctcattgggatataggtacaggtcttgatatattagattttgaaagagctggtaaagta
acaggatcaagattcactttttacaagggactaggtgctagacttgaaagagccataata
aattatttcttagatactcatactgaaaaaggatatgttgaagtattaccaccatatatg
gctaatagagcatctatgacaggaacaggccaattacctaagtttgaagaagatgcattt
aaggtagagaataatggatatttcttaattcctacagcagaagtaccagttactaatatg
tatagagacgaaataatatcaggagataagttacctataaagcatgtagcttattcagca
tgttttagagcagaagcgggttctgcaggaagagatacaagaggacttgttcgtcaacat
caatttaataaggttgagttagtaaaattcacaaagccagaagatagttatgatgagtta
gataaattaacagcagatgcggaagctgtacttcaaggtttaggattaccatatagagta
gtaagaatatgtaaaggtgatttaggatttacagctgctttaaaatttgatatagaagtt
tggatgccaagttataatagatatgttgaaatttcaagctgttctaattttgaagatttc
caagcaagaagagcaaatattaaatataaagaagatccaaaatcaaaagctcaatttgtt
catacgttaaatggatcaggggtagctataggtagaactgttgctgctatattagaaaac
ttccaaaatgaagatggaactgtaacaattccagaagcattaaaaccatatatgggtgga
agagatattattaaatag

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