Clostridium bornimense: CM240_0020
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Entry
CM240_0020 CDS
T03165
Symbol
serS
Name
(GenBank) Serine-tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
clt
Clostridium bornimense
Pathway
clt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CM240_0020 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clt01007
]
CM240_0020 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clt03016
]
CM240_0020 (serS)
Enzymes [BR:
clt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CM240_0020 (serS)
Amino acid related enzymes [BR:
clt01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CM240_0020 (serS)
Transfer RNA biogenesis [BR:
clt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CM240_0020 (serS)
Prokaryotic type
CM240_0020 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
NPV_P10
LPP
FapA
POTRA
KASH_CCD
Uso1_p115_C
Motif
Other DBs
NCBI-ProteinID:
CDM67213
UniProt:
W6RSJ2
LinkDB
All DBs
Position
rep1:22814..24091
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AA seq
425 aa
AA seq
DB search
MLDLKRIRTDAEEVKRALGNRGEDFDVSIIDKIVELDEERRKILVEVEALKSKRNADSAK
VPALKKAGEPVDEIFAEMKKISEEIKGLDEKVSKISEEIDYHMLRIPNIPNPSVPDGASD
EDNVEIRKWGEPRKFDFEAKAHWDIGTGLDILDFERAGKVTGSRFTFYKGLGARLERAII
NYFLDTHTEKGYVEVLPPYMANRASMTGTGQLPKFEEDAFKVENNGYFLIPTAEVPVTNM
YRDEIISGDKLPIKHVAYSACFRAEAGSAGRDTRGLVRQHQFNKVELVKFTKPEDSYDEL
DKLTADAEAVLQGLGLPYRVVRICKGDLGFTAALKFDIEVWMPSYNRYVEISSCSNFEDF
QARRANIKYKEDPKSKAQFVHTLNGSGVAIGRTVAAILENFQNEDGTVTIPEALKPYMGG
RDIIK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgttagatttaaaaagaataagaactgatgcagaggaagtaaaaagagcgttaggaaac
agaggagaagattttgacgtctctattattgataaaatagttgaattagatgaagaaaga
agaaaaatactagttgaagttgaagcattaaagagtaagagaaatgctgattcagcaaag
gttccggcattaaagaaagcaggagaaccagtagatgaaatatttgcagaaatgaagaaa
atttcagaagaaataaaaggattagatgaaaaggtatcaaagattagtgaagaaatagat
tatcatatgcttagaatacctaatataccaaatccatcagttccagatggggcttctgat
gaagacaatgtagaaattagaaaatggggagaacctagaaaatttgattttgaagcaaag
gctcattgggatataggtacaggtcttgatatattagattttgaaagagctggtaaagta
acaggatcaagattcactttttacaagggactaggtgctagacttgaaagagccataata
aattatttcttagatactcatactgaaaaaggatatgttgaagtattaccaccatatatg
gctaatagagcatctatgacaggaacaggccaattacctaagtttgaagaagatgcattt
aaggtagagaataatggatatttcttaattcctacagcagaagtaccagttactaatatg
tatagagacgaaataatatcaggagataagttacctataaagcatgtagcttattcagca
tgttttagagcagaagcgggttctgcaggaagagatacaagaggacttgttcgtcaacat
caatttaataaggttgagttagtaaaattcacaaagccagaagatagttatgatgagtta
gataaattaacagcagatgcggaagctgtacttcaaggtttaggattaccatatagagta
gtaagaatatgtaaaggtgatttaggatttacagctgctttaaaatttgatatagaagtt
tggatgccaagttataatagatatgttgaaatttcaagctgttctaattttgaagatttc
caagcaagaagagcaaatattaaatataaagaagatccaaaatcaaaagctcaatttgtt
catacgttaaatggatcaggggtagctataggtagaactgttgctgctatattagaaaac
ttccaaaatgaagatggaactgtaacaattccagaagcattaaaaccatatatgggtgga
agagatattattaaatag
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