Columba livia (rock pigeon): 102083939
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Entry
102083939 CDS
T02912
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03420
Nucleotide excision repair
clv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102083939 (DDB1)
09124 Replication and repair
03420 Nucleotide excision repair
102083939 (DDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clv04121
]
102083939 (DDB1)
03400 DNA repair and recombination proteins [BR:
clv03400
]
102083939 (DDB1)
Ubiquitin system [BR:
clv04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Adoptor protein
102083939 (DDB1)
DNA repair and recombination proteins [BR:
clv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
102083939 (DDB1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
102083939 (DDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
102083939
NCBI-ProteinID:
XP_005514919
UniProt:
A0A2I0LHV3
LinkDB
All DBs
Position
Unknown
AA seq
1129 aa
AA seq
DB search
MAIFPLHFPGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKG
ESKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMI
GLRLYDGLFKVIPLDRENKELKAFNIRLEELQVIDVKFLYGCQAPTICFVYQDPQGRHVK
TYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPP
IIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIA
ECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQG
QGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDAHRETDNMLVLSFVG
QTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWK
EPNGKNISVASCNSSQVVVAVGRALYYLEIRPQELRQISCTEMEHEVACLDITPLGDTNG
MSPLCAIGLWTDISARILRLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGAL
FYFGLSLETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNV
NLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQ
CFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSSSTAPHETSFGEEVEVHNL
LIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVF
HYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRTECNHYNNIMA
LYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENA
FNLFVCQKDSAATTDEERQHLQEVGLSHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFG
TVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATGFIDG
DLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggcaatttttcctctccattttccaggccacttcacctcggcagaggatctgaacctg
ctgatcgccaagaacacgcgcctggagatctacgtggtgacggcggaggggctgcggccc
gtcaaggaggtggggatgtatggcaagatcgccgtcatggagctgttccgccccaagggg
gagagcaaggatttgttgttcatcctgacggccaagtacaacgcctgcatcctggagtac
aagcagaacggcgacagcatcgacatcatcacccgcgcccacggcaacgtgcaggatcgc
atcggtcgtccctcggagaccggcatcatcggcatcatcgaccccgagtgccggatgatt
ggcctgcggctctacgacggcctcttcaaggtcattcccctggaccgggagaacaaggag
ttaaaagcttttaacatccgcctggaggagctccaagtcatcgacgtcaagttcctctac
ggctgtcaggctcccaccatctgcttcgtctaccaggaccctcagggtcgacacgtcaag
acgtacgaggtgtctctacgcgagaaggagtttaacaaggggccttggaaacaggagaac
gtagaggccgaagcctccatggtcatcgcagtgccggagccttttggaggcgcgatcatc
atcgggcaggagtccatcacctatcacaacggagataaatatctcgccatagctccaccc
atcatcaagcaaagcacgatcgtgtgccacaaccgcgtggatcccaacgggtcccgttac
ctgctgggggacatggaagggcggctcttcatgctgctgctggagaaggaggagcagatg
gacggcaccgtcaccttgaaggacctgcgcgtggagctgctcggcgagacatccattgca
gagtgcttgacctacctggacaacggagttgtgtttgttggctctcgccttggcgattcg
cagcttgtgaagctcaacgtggacagcaacgagcaaggctcctacgtggtggccatggag
accttcaccaacctggggcccatcgtcgacatgtgtgtggtagacctggaaagacaaggc
caagggcagctggtcacgtgctcaggcgcatttaaagagggttccctgcggatcatccgg
aacggcatcgggatccacgaacacgccagcatcgacctgccgggaattaaaggtttatgg
cccctgaggtcagatgctcaccgtgagacagacaacatgctggtgctgtcctttgtgggt
cagaccagggttttgatgttaaatggagaggaggtggaagaaacggagctcacagggttt
gtggatgatcagcagactttcttctgcggcaacgtggcgcatcagcaattgatccagatc
acctctgcctctgtcagactcgttagccaagaacccaaagccctggtgagtgagtggaaa
gagcccaatggcaagaacatcagcgtggcctcctgtaacagcagccaggtggtggtggct
gtgggacgagcgctctactacctggagatccggcctcaggagctccggcagatcagctgc
acagaaatggagcacgaagtggcctgcctggacatcacccctctgggagacactaacggc
atgtccccgctctgcgccatcgggctctggaccgacatctccgcccgcatcctcaggctg
ccttcgtttgagctgctgcacaaagagatgctgggaggagaaattatccctcgctccatc
ctgatgacgacctttgagagcagccactacctcctgtgtgccctgggggacggagctctc
ttctacttcggcctcagcctcgagacaggtttgctgagtgaccgaaagaaggtgaccctt
gggacccagcccactgtcctgaggacattccgctctctctccaccaccaacgtcttcgcc
tgttctgaccggcccaccgtcatctacagcagcaaccacaagctggtcttctccaacgtc
aacctgaaggaagtgaactacatgtgtcccctcaactccgatgggtatcctgacagcttg
gcactggccaacaacagcaccctgacaatcggcaccattgatgagatccagaagctgcac
atccgcacggttcccctctacgaatcgcccaggaaaatctgctaccaagaggtctcgcag
tgtttcggcgtgctctccagccgcatcgaggtgcaggatgccagcgggggcaccacagcg
ctccggcccagcgccagcacccaggccctgtccagcagcgtgagcaccagcaagctgttc
tccagcagcacggcgccacatgagacgtccttcggcgaggaggtggaggtgcacaacctg
ctcatcatagaccagcacacctttgaagtgcttcacgctcaccagtttctgcagaacgaa
tatgccctcagcctggtctcctgcaagcttggcaaggaccccaacacctacttcatcgtg
ggcactgccatggtctatccagaggaggcagagcccaagcagggccgcatcgtcgtcttc
cactactctgacgggaagctgcagagcctggccgagaaggaggtgaagggcgctgtgtac
tccatggtggagttcaacgggaagctcttagccagcatcaacagcacggtgcgcctgtac
gagtggacggcggagaaggagctgcgcacggagtgcaaccattacaacaacatcatggcg
ctctacctgaagaccaagggcgacttcatcctcgtgggagacctgatgcgttccgtcctc
ctcctggcctacaagcccatggaaggaaactttgaggagattgcccgggacttcaatcca
aactggatgagcgccgtggaaatcctggacgacgacaacttcttgggagcagagaacgct
ttcaacttgttcgtgtgccagaaggacagcgcggccaccaccgacgaggagcgtcagcac
ttgcaggaggtgggactgtcccacctgggagagttcgtcaacgttttctgtcatggctcc
ctggtcatgcagaacctgggcgagacgtccacgccgacacagggctcggttctcttcggc
acggttaacggcatgatcgggctggtgacctcgctgtcggagagctggtacaacctcctg
ctggacatgcagaacaggttgaacaaagtcatcaagagcgtgggcaagattgaacactcc
ttctggagatcatttcacaccgaacgcaagacagaaccggcgacgggcttcatcgacggc
gacctgatcgaaagcttcctggacatcagcaggcccaagatgcaggaggtggtggcgaat
ttgcagatcgacgacggcagcggcatgaagagagaagccaccgtggacgacctgataaag
atcgtggaggagctgacccgcatccattag
DBGET
integrated database retrieval system
