Columba livia (rock pigeon): 102089810
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Entry
102089810 CDS
T02912
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03030
DNA replication
clv03420
Nucleotide excision repair
clv03430
Mismatch repair
clv03440
Homologous recombination
clv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102089810 (RPA1)
03420 Nucleotide excision repair
102089810 (RPA1)
03430 Mismatch repair
102089810 (RPA1)
03440 Homologous recombination
102089810 (RPA1)
03460 Fanconi anemia pathway
102089810 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clv03000
]
102089810 (RPA1)
03032 DNA replication proteins [BR:
clv03032
]
102089810 (RPA1)
03400 DNA repair and recombination proteins [BR:
clv03400
]
102089810 (RPA1)
Transcription factors [BR:
clv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102089810 (RPA1)
DNA replication proteins [BR:
clv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
102089810 (RPA1)
DNA repair and recombination proteins [BR:
clv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
102089810 (RPA1)
MMR (mismatch excision repair)
102089810 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
102089810 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF5521
DUF4939
Motif
Other DBs
NCBI-GeneID:
102089810
NCBI-ProteinID:
XP_013222292
UniProt:
A0A2I0M209
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MQGEDVSKPVLQVINTRAIATGNGPPRYRMLMSDGVNTLSSFMLATQLNSLVEEERLAAH
CICQVNKFYVNSLKDGRRVVILMDLNVLKTADKVGGNIGNPVPYNEGQGQQRSSAPAANP
APGKPQQQNGNVSVAGPAAPKYHAPSNQFGKASAPNLLKTPGGSQVKVVPIASLNPYQSK
WTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADKFFPLIELNKVYY
FSKGTLKSANKQYTAIKNDYEITFTSETSVVPCDDAQHLPSVQFDFVSISDLENTPKDSI
VDVIGICKSYEDVTKIIVKANNREVSKRNVHLMDTSGKLVTATLWGNEAEQFDGSRQPVI
AIKGARVSDFGGRSLSVLSSSTVIINPDSPEAFKLRGWFDSEGQLLECTSISDVRGGLAA
GANTNWKTLFEAKAENLGQGDKADYFSCVGTVVHLRKENCMYQACPSQDCNKKVIDQQNG
LYRCEKCDREFPNFKYRMMLLVTIADCLEYQWVTCFQDTAEFILGQKAAFLGELKEKNEQ
AFEEVFQNANFNTYEFRIRVKLETYNDESRIKATAVDVKPVNYREYSKRLIASIRRNAQL
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcagggggaggacgtctccaagcccgtgctgcaagtcattaatacccgggctattgcc
acgggaaatgggccaccgcgttaccgaatgttgatgagtgacggggttaacaccctttcc
tcattcatgttggcgacacagctgaactctcttgtggaagaggaacgcttagcagcccac
tgtatttgtcaagtgaacaagttctatgttaacagcctgaaagatggaaggagagtggtt
atactgatggatttaaatgttctgaaaactgctgataaggttggtgggaatattggcaat
ccagtgccgtacaatgaagggcaagggcagcaacgttcttcagctccagcagcaaaccca
gcacccggcaaaccacaacaacaaaatggcaatgtgtcagtagcaggtcctgctgctccg
aagtaccacgctccctcaaaccagtttggtaaagccagtgctcccaatttgttgaagaca
ccagggggatcgcaggtcaaagtggtgccaatcgccagcttgaacccctaccagtccaag
tggaccatttgtgctcgtgttacccaaaaaggccagatccgcacgtggagcaactcccgt
ggtgaaggaaagctcttttctatagagctagtcgatgaaagcggtgagattagagctact
gcattcaatgatcaagcagacaagttctttcctctcatcgaattgaacaaggtatattat
ttttccaaaggcactttgaagagcgctaacaagcaatatacagctattaagaatgactat
gagattacattcactagtgagacttcagttgtgccctgtgatgatgctcagcatcttcca
tctgttcagtttgacttcgtgtccatctctgacttggagaacacacccaaagactcaatt
gttgatgtaattggaatttgcaagagctatgaagatgtcactaaaattatagtgaaagcg
aacaatagggaggtatcaaagaggaacgtgcatctgatggatacatcagggaaactggtg
acagctacgctgtggggaaatgaggctgaacagtttgatggttctagacaacctgtgata
gccatcaaaggagcccgagtctctgacttcggcggtaggagcctgtctgtcctgtcctcg
agtacagttatcatcaaccctgatagcccagaggcttttaagctccgaggatggtttgac
tcggaggggcagcttctggaatgtacctccatctctgatgtgaggggtgggctggcggct
ggggccaacaccaattggaaaactttgtttgaagccaaagctgagaacttgggccaagga
gataaggcggattattttagctgtgtgggcacagtcgtacatctgcgcaaagagaactgt
atgtaccaggcatgtccctctcaggattgcaataagaaagtgatagaccaacaaaatgga
ctgtaccgttgtgaaaagtgcgatcgtgaattccccaacttcaagtaccgcatgatgctt
ctcgtgaccattgcagactgtctagagtatcagtgggtgacttgttttcaagacacagca
gaattcattcttgggcaaaaagcggctttcctgggagaactgaaggaaaagaatgagcag
gcgtttgaagaagtgttccaaaacgcaaacttcaacacgtacgagttcaggatccgagta
aaactggagacttacaatgatgaatctcgtattaaggctacggcggttgacgtcaaacct
gtgaactacagagaatacagcaagaggttgatcgcgagcatcaggagaaacgctcagctg
gggtga
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integrated database retrieval system
