Columba livia (rock pigeon): 102091264
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Entry
102091264 CDS
T02912
Symbol
SHPRH
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clv04121
]
102091264 (SHPRH)
Enzymes [BR:
clv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102091264 (SHPRH)
Ubiquitin system [BR:
clv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102091264 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
PHD
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
TPR_12
PEP-utilisers_N
TPR_10
TPR_2
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
102091264
NCBI-ProteinID:
XP_021150424
LinkDB
All DBs
Position
Unknown
AA seq
1678 aa
AA seq
DB search
MSSRRKRAPPSKVDEEKKKKLCWNMHEDRRNEVITLDDEETNEDHVPGPSTSSASIIVIN
DDSTDEDLIEKEGSGSKSVKFLAVNDEEDSYSILTPVSVQLNIIVLPYHADGSWKALLGE
FALHLPSEQVLTDEFRERSFTLRGDSDDQLQLCVHERSEEEYSNETKEYLGAYEQCILVK
STLGGEILEGLRWLQKKKIIGLYQRPGEAQALKVGIYLLEAGLSKPEFLSDGGGRPKKAN
QLIQKLMEKFYSFLIPDELEEDEEESDMELERQNIEELYDFVRHTHQQDIQSLREDVQHP
ALIPVLRPYQSEAVNWMLHRENLTNTPSSENALHFLWREVITLDGVKIYYNPFTGCIIRE
YPIAGPQWPGGILADEMGLGKTVEVLALILTHTRPDMKQDDLTLPEGKLVNFFVPPQPLE
GNKKKKTKEMELKLKEKIQYPSLRVMILAAVKEMNVKKGASIIAIFKYISAVYRYDIQRN
RRLLKRTLEKLIAEQVVEQVKGHGLAGSFKLGKNYKEQKRRERTKEQIARTSESSQKKQL
IDAKTQTKESRNSDVTSADVLKTPLRVDITMEEHDYCTAGKNNXAVVPKSPDSPGSLRDA
SGVSSHPDFDVSKTTADVKEEVPKDQSSHSQEHASSSIQHASSVFPFNTSEYRFECICGE
LGLADYKARVQCLKCYLWQHAECVNYKEENLKIKPFYCPHCLVAMKPVSTGATLIISPSS
ICHQWVDEINRHVRSSSLRVLVYQGVKKHGFLQPHMLAEQEVVITTYDVLRTELNYVDIP
HSNSEDGRRFRNQKRYMAIPSPLVAVEWWRICLDEAQMVECTTAKAAEMALRLSGINRWC
VSGTPVQRGLEDLYGLVLFLGVDPYWVKHWWDQLLYRPYCRKNPRPLYSLIAKIMWRSAK
KDVIDQIQIPPQTENVHWLHFSPVERHFYHRQHEVCCQDALAKLRKISDWTLKLSSLDRR
TVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCRTECEEAHRQLVC
ALNGLAGIHIIKGEYALAAELYREVLRSSEEHKEKLKTDSLQRLHSTHNLMELLLAKHPG
IPPTLRDSRLAEEAEQLRQHYMSKSNAEVADAHQALQPVLQTIRELQRKIHSGSPWWLDV
IQTAIQYAIDEELVQRVQNEITCNYKQQTNKLSMAEKFRDCRGLQYLLTTQLEDVKKFQK
IVREAVKNLEGPPSKQVIEAATICHLRPVRLPLNNCVFCKADELFTEYESKLFSHTVTGQ
MAIFEEMIEDEEGLVDDRLPTTSRGLWATSETERALKAILSFAKAHRMDVKLTEEGSIFL
ELFEAWKKEYKLLHEYWMVLRDHVSAIDELAMATERLRVRHPDEPKPNPPVLHIIEPHEV
EQNRVKLLNDKAVAKSQLQKKLGQLLYLTNLEKSQDKTTGGVNPEPCPICAHQLGKQWAV
LTCGHCFCNECVAIIIEQYSVGTRRSSIKCAICRQTTSHKEISYVFTAETANQEDDIPVK
GSHSTKVEAVVRTLKRIQFKDPGAKSLVFSTWQDVLDIISKALYDNNMTFSQINGINKFQ
ENLSAFKYDPNINILLLPLHTGSNGLNIIEATHVLLVEPILNPAHELQAIGRVHRIGQTK
STIVHRFLIKATIEERMQTMLKTVDRSHTSSSMKQSEASVLTVADLADLFTEETEELE
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcgtcgaaaacgtgcacctccatcaaaagtagatgaagagaagaagaaaaag
ctctgctggaatatgcatgaagaccggagaaatgaggtgataacgttagatgatgaagag
actaatgaggaccatgttccaggtccaagcacttcttctgcatccatcattgttataaat
gatgatagcactgatgaagatctcattgaaaaagaaggcagtggctcaaaatctgttaag
tttttagcagttaatgatgaggaagactcatattccatcttgactcctgtgtcagtacag
ctaaatattatagtcttgccataccatgcagatgggtcctggaaagctctgttgggagaa
tttgctcttcatcttccttctgagcaagttttaactgatgaattccgtgaaaggagtttt
actttgagaggagactctgatgatcagctgcagctctgtgttcatgaaagaagtgaagaa
gagtacagtaatgaaacaaaagaatacctgggagcttatgagcaatgtattttggtgaaa
tcaactttaggtggtgaaatattggaaggcttgagatggttgcaaaagaaaaagataatt
ggactttatcaaagacctggagaggctcaagctttaaaggttggaatttaccttctggaa
gctgggctaagtaaaccagagtttctcagtgatggaggtggaagacccaaaaaagctaat
cagctgattcaaaaactcatggaaaagttctatagttttttaattccagatgagctggag
gaagatgaggaagaatctgacatggaattagagcgacaaaatattgaagagctttatgac
tttgtgaggcacacccatcagcaggatatccagtcactgagagaggatgtgcagcaccct
gcgttaattcctgttctgaggccttaccaaagtgaggctgtgaattggatgctgcaccga
gagaacctcacaaacactccaagcagtgagaatgcactgcatttcttatggcgggaggtc
atcactctggatggagttaaaatctactataatccatttactggctgtattatccgtgaa
tatccaattgctggaccccagtggcctggaggtattttggcagatgagatgggtcttgga
aaaacagttgaagtgttggcccttattctgactcatacacgaccagacatgaaacaagat
gatctgacgttacctgagggtaagcttgtgaacttctttgttccacctcaacctttggaa
ggaaataaaaagaaaaaaacaaaggagatggagcttaaattgaaggagaaaatacaatat
cccagcttacgagtgatgatattagcagctgtaaaggaaatgaatgtgaagaaaggagca
tctattattgcaatatttaagtacatcagtgctgtatataggtatgacatacagagaaat
agacggcttctcaaaagaactctagaaaaattaattgcagaacaagtggtagaacaagtg
aaaggacatggtctggctggatctttcaagctgggaaagaattacaaggaacagaagagg
cgagaaagaaccaaagagcagatagcaaggacttcagaaagcagtcagaaaaagcagttg
attgatgctaaaactcaaaccaaagaatcaaggaatagtgatgtcacttcagcagatgtc
cttaaaacccctttacgggtggatatcaccatggaagaacatgattattgtacagctggc
aaaaataacnnagctgtggtcccaaagtctcccgattcacctggcagcctccgggacgcc
agtggtgtgagcagtcatcctgactttgatgtttctaaaactacagctgatgtcaaggag
gaagttccgaaggaccagtcctcacattcccaagagcatgccagcagtagcatacaacat
gccagttctgtatttcccttcaatacctctgagtatcgttttgaatgcatttgtggcgag
cttggactggctgactataaagctcgtgtgcagtgcctcaaatgttacttatggcagcat
gcagaatgtgtgaactacaaagaggaaaacctgaagattaagcctttctactgtccccat
tgtcttgtggcaatgaaacccgtttccacaggagcaactctgataatttctccaagttct
atttgtcatcagtgggtagatgagatcaacaggcatgtaagatcatcttctcttcgagtt
ctggtgtatcaaggtgtgaagaagcacggctttttgcagccacacatgttggcagagcag
gaggtggttatcaccacatacgatgtcctccgcactgagctgaactatgtggacataccc
cacagtaacagcgaagatgggcgccgcttcaggaaccagaagcggtacatggccatccca
agccccttagtagcagtggagtggtggaggatctgccttgatgaagcacagatggttgaa
tgcactactgcaaaggctgctgaaatggcactccgtttaagtggaataaatcgctggtgt
gtcagtggcactcctgtgcagcgaggattagaagatctatatggattagtcctttttctt
ggagttgatccttactgggtcaaacattggtgggaccaacttttatatcgaccttattgc
aggaaaaatccccggcctctctacagtctaattgccaagataatgtggagatcagcaaag
aaggatgtgattgaccaaattcaaatcccccctcagacagaaaatgtacactggcttcac
ttttctcctgtggagagacacttttatcatcgccagcatgaggtgtgctgccaggatgcg
ttggcaaaactcaggaagatttctgactggactcttaagcttagtagcctggatagaagg
actgtgacctctattctgtaccctttgctgcggctgaggcaggcctgctgtcatccacaa
gctgttaggggggagttcttgccgttacagaaaagcaccatgaccatggaggaattgctt
acatctctgcagaagaaatgtcgaacagagtgtgaggaagctcaccgacagctggtgtgt
gctcttaatggcttagctggtatccatatcattaaaggagaatatgcattggctgcagag
ctgtacagagaagtgttacgatcatctgaagagcacaaagaaaagctcaaaacagattcc
ttgcaaagacttcattctactcacaacttgatggaattgttgttggcaaagcacccagga
attcccccaactttacgtgatagccgacttgcagaagaggcagaacaacttcgacagcat
tatatgagtaaatccaatgcagaagttgcagacgcccaccaggccttgcagccagttctt
cagaccattcgagagctccagagaaagatacattcaggttctccttggtggttggatgtc
atccagacagcaatacagtatgccatcgatgaggagcttgttcaacgtgtgcaaaacgaa
ataacgtgcaactacaaacagcagactaataaactctccatggcagagaaattccgtgac
tgcagaggccttcaatacctgctcacaacccagctggaggacgtgaagaagttccaaaag
attgtaagagaagcagtgaaaaacttggaaggccctccctctaagcaggtcattgaggct
gccaccatctgccatttacgacctgttagacttccacttaacaactgtgtcttttgtaag
gctgatgagttgttcacagaatatgagtcaaagctcttttctcatactgttacaggccaa
atggcaatatttgaggagatgatagaagatgaagaagggctcgttgatgaccgtttgccc
actacaagtagaggactgtgggcaaccagtgaaactgaacgtgccttgaaagcaattctc
tcctttgccaaagctcaccgaatggatgttaagctaactgaagaaggcagcatatttcta
gaactctttgaagcgtggaaaaaggaatacaagttgcttcatgaatattggatggtactg
agggatcatgtgtctgctattgatgagctggcaatggctacagaacggctgagagtgcgt
catcctgatgagccaaaaccaaatccaccagttctccacatcatagaaccacatgaggta
gagcaaaatcgagtgaaacttttgaatgacaaggcagttgccaaatcacagcttcaaaag
aaattaggacaacttctgtatctcactaatctggagaagtctcaagataaaactactggg
ggagttaaccctgaaccatgtccgatctgtgcacatcagctggggaaacagtgggcagtg
ctgacgtgcggacactgtttttgtaatgagtgtgtagctatcatcatagagcagtacagc
gttggcacccgacggagctcaattaaatgtgccatttgcaggcagacaacatctcataaa
gaaatatcatatgtcttcactgcagaaactgcaaatcaggaggatgatatccctgtaaag
ggaagtcactccaccaaagtggaagctgtggtccgaacgctgaagagaattcaatttaaa
gacccaggggctaaatccttagttttctcaacgtggcaagatgtgttggacataatttca
aaagctttgtatgacaacaacatgactttttctcaaatcaatggaattaataagtttcag
gagaatctctctgcatttaaatatgatccaaacatcaatattttgctgctgcctcttcac
actggttccaatggactaaatatcatcgaagcgactcacgttctgcttgtggaacccatt
ctgaatcctgcacatgagctacaggctattggcagagtacatcgtattggccaaacaaaa
tctaccattgttcataggttcctgataaaagcaacaatagaagagagaatgcagactatg
ctgaaaactgtagatagaagccacacaagctcttccatgaaacagtcagaagcctccgtt
ctgacagtggcggatttggctgatcttttcacagaggaaactgaagaacttgagtga
DBGET
integrated database retrieval system
