Columba livia (rock pigeon): 102098641
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Entry
102098641 CDS
T02912
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03420
Nucleotide excision repair
clv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102098641 (ERCC8)
09124 Replication and repair
03420 Nucleotide excision repair
102098641 (ERCC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clv04121
]
102098641 (ERCC8)
03400 DNA repair and recombination proteins [BR:
clv03400
]
102098641 (ERCC8)
Ubiquitin system [BR:
clv04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
102098641 (ERCC8)
DNA repair and recombination proteins [BR:
clv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
102098641 (ERCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Nup160
Motif
Other DBs
NCBI-GeneID:
102098641
NCBI-ProteinID:
XP_013227449
UniProt:
A0A2I0M554
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MLSGGSDGVIVLYDLENLSRKPSYTCKALCSVGRSHPDVHRFSVETVQWYPHDTGMFTSS
SFDKTLKIWDTQTLQAADVFHFEGTVYSHHMSPVATKHCLIAVGTKSPQVQLCDLKSGSC
SHILQGHRQEVLAVSWSPRHEYVLATASADNRVKLWDVRRASGCLTTLDQHNGEKSKASS
EAANTAHNGRVNGLCYTHDGLHLLTIGTDDRMRLWNSSTGENTLVNYGKVCNESRKGLKF
TVSCGCNPEFAFVPYGSTVAVYTVFTGELITMLRGHYSTVYCCVLQPNFQELYSGSKDCN
ILAWIPSLRESVPDDIPEKSLPQQHLNPAYEDAWSSSEDES
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgttatccggtgggtcagatggtgttattgtgctttatgaccttgaaaacctgagcaga
aaaccaagttacacgtgtaaagcactttgttctgtgggaaggagccatcctgatgtacat
agatttagtgtggagacagtccagtggtatcctcatgacactggcatgtttacgtcgagc
tcatttgataaaaccttgaaaatatgggacacacaaactttacaagctgcagatgtattt
cactttgagggaacagtctatagccatcacatgtctccagttgccacaaagcattgttta
atagcagttggtaccaaaagcccccaagtacagctctgtgacttgaagtctggatcctgt
tctcacattctgcagggtcacaggcaagaagtactggcagtatcttggtctccacgtcac
gagtatgttctggcaacagcaagtgctgacaacagagtaaaattatgggatgtgaggaga
gcatctggatgtctgactacacttgatcagcacaatggagaaaagtccaaagcatcttcc
gaggcagcaaacactgctcacaatgggagagttaatggtctatgctacacacatgatgga
cttcatctgttgaccattggcacagatgatcggatgcgactctggaacagctccactgga
gaaaacacattagtgaattatgggaaagtctgtaatgaaagcagaaaaggactcaaattc
accgtctcctgtggctgtaatccagagtttgcctttgtaccatatggtagcaccgttgct
gtttatacagttttcacaggagaactgatcactatgcttcgagggcattatagtactgtc
tactgctgtgtattgcaacctaattttcaggaactttatagtggtagcaaagactgcaat
atccttgcatggataccatctcttcgagagtcagttcctgatgacattcctgaaaagtct
ctgcctcaacagcatttaaatccagcatatgaagacgcatggagcagcagtgaagatgaa
agctga
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