Chlorobaculum limnaeum: BIU88_08010 Help Entry BIU88_08010       CDS       T04492                                  Name (GenBank) RNA-splicing ligase RtcB   KO K14415   tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] Organism clz  Chlorobaculum limnaeum Brite KEGG Orthology (KO) [BR:clz00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03016 Transfer RNA biogenesis [BR:clz03016]     BIU88_08010 Enzymes [BR:clz01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase      BIU88_08010 Transfer RNA biogenesis [BR:clz03016]  Eukaryotic type   tRNA spricing factors    tRNA splicing ligase complex     BIU88_08010  Prokaryotic type    tRNA splicing ligases     BIU88_08010 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RtcB Motif Other DBs NCBI-ProteinID:  AOS84085 UniProt:  A0A1D8D338 LinkDB All DBs Position complement(1790731..1792128) Genome browser AA seq 465 aa AA seqDB search MERSSIRQISGWLWEIPRSYRSDMCVPARFYASEAMLEQILADRSLEQLVNVATLPGIVG FALAMPDIHEGYGFPIGGVAAFDLDLGVISPGGIGYDINCGVRLLASRSSFETIRDKIPD LASEIYRQVPSGVGRGNKIAFSSAQLDRVLREGARCMVALGYGEPGDLDHIESGGMLDVA DPSKVSPQAKQRGHDQLGTMGAGNHFVEIDRIDAIYDRDAAGRMGLFEGQVVIQLHTGSR GLGHQIATDYIRVMNRAMPSYGIEVPDRELCCAPFRSLEGQEYFSAMSAGANFAWANRQL ITWEIRQAWKSVMGSDPLRVVYDVAHNIAKIETHEIDGQRRQLLVHRKGATRAFPGQPVI IPGSMGTASFVLEGEAASMRESFGSSCHGAGRRMSRTKARHTVQGNQLRMELEAMGISVQ AGSMQGLAEEAPAAYKDIGEVVGAVVSAGIAKKVATLVPVGVMKG NT seq 1398 nt NT seq  +upstreamnt  +downstreamnt atggagcggtcgtcgatcaggcagatttcaggctggctgtgggagattccgcgctcgtac cgcagcgacatgtgcgttccggcgcgattttacgcttccgaagcgatgctcgaacagatt ctcgccgaccgttcgctggagcagctcgtcaacgtcgccacgctgcccggcatcgtgggg ttcgcgctggccatgcccgacattcacgaggggtacggctttccgattggcggcgtggcg gccttcgacctcgacctgggcgtcatctcccctggcggcatcggctacgacatcaactgc ggcgtgcgccttctggcgagccggtcttccttcgaaactatccgcgacaagattcccgac ctcgccagtgaaatctaccgccaggtgccctccggcgtcgggcgcggcaacaagatcgcc ttttcatccgcccagctcgaccgcgtgcttcgcgaaggggcgcgctgcatggtggcgctt ggctacggagagccgggtgatctcgaccacatcgagtcgggcggaatgctcgacgtggcc gatccgtcgaaggtttcgccgcaggccaaacagcgcggccacgaccagctcggcacgatg ggagcgggcaatcatttcgtggagatcgaccggatcgacgccatttacgaccgcgacgcc gccgggcgcatgggactattcgaggggcaggtggtgatccagctccacaccggctcgcgc ggcctcggccaccagatcgccacggactacatccgcgtcatgaaccgcgcgatgccgtcg tacggcatcgaggtgcccgaccgcgagctctgctgcgcgccgttccgttcgctggaggga caggagtacttcagcgccatgtcggcgggcgcgaacttcgcctgggcgaaccgccagctc atcacctgggagattcggcaggcgtggaagagcgtgatgggtagcgatccgttgcgcgtg gtctacgatgtagcgcacaacatcgccaagatcgaaacgcacgaaatcgacggccagcgg cggcagctcctcgtgcatcgcaagggcgcgacccgcgcctttcccggccagccggtgatc attcccggcagcatgggaaccgcctcgttcgtgctggagggagaggcggcatcgatgcgc gaaagcttcggctcgtcgtgccacggcgcggggcggcggatgtcgcggacgaaagccagg cacacggtgcagggcaatcagctcaggatggaactcgaagcgatgggtatctcggtgcag gccggatcgatgcagggcctcgctgaggaggctcccgccgcctacaaggatattggcgaa gtggtcggcgcggtggtgtcggcaggcatcgcaaagaaagttgcaacgcttgtgccggtg ggggtgatgaaggggtga

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