Cobetia marina: BFX80_11340
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Entry
BFX80_11340 CDS
T04789
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
cmai
Cobetia marina
Brite
KEGG Orthology (KO) [BR:
cmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmai03000
]
BFX80_11340
Transcription factors [BR:
cmai03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BFX80_11340
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AOM01778
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Position
complement(2778724..2779647)
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AA seq
307 aa
AA seq
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MTLKQLKAFVAVARTLSFVEAGTLVHLSQPALSLAVKNLEESLGGRLFQRSTRQVSLTPE
GRAFFPLARRILSDWEHAEDEMRQRFSLGRGRVALAAMPTFAGNLLPGVLADFRRQFPEI
TIEVNDVIAEEVVERVTDGRVELGICFDPGVREDLVFESLFEDRYIAIIPEGHALLQGAP
ETIHWDQLLEEDFITLQRPSGVRHMLERRLAEAGLKLTVAFETHQLVTCGRMVAEGLGVS
AVPAMSADQMSALGCRCLELEGPVIEQRVGVIRRGRHELSVAVQAMLDTLRARYPVSPPP
VPDEDLA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgaaacagttgaaagcctttgtcgcagtggccagaaccctgtccttcgtggaa
gcgggcacgttggtgcatctttcccagccggcattgtcgctggccgtcaagaatctggag
gagtcgttgggtgggcgtctgttccagcgttccactcgacaggtcagcctgacgccggaa
ggacgggccttcttcccgctggctcgcaggatactgtcggattgggagcatgctgaggac
gagatgcgccagcgattcagtctcggacgcgggcgtgtggcactggctgccatgccgact
ttcgccgggaatctgctgccaggagtactggcggattttcgacggcagttcccggagatc
accatcgaggtcaatgacgtgatcgccgaggaagtcgtggagcgtgtcaccgatgggcgc
gtggaactggggatctgttttgatcccggggtacgcgaggaccttgtcttcgaatcactc
ttcgaggatcgctacatcgcgatcattcccgaggggcacgccctgttgcagggcgctccc
gagaccatccattgggatcagctgctggaagaggatttcatcaccctgcaacgtccctcg
ggcgtgcgacacatgctggagcggcgcctggcagaggcggggctcaagctcaccgtcgcc
ttcgagactcaccagctggtgacctgcggacgcatggtggcagagggacttggcgtcagc
gcggtgccggcgatgagcgccgatcagatgtcagcgctgggatgtcggtgcctggagctg
gaagggccggtcatcgagcaacgggtcggcgtgattcgccgcggccgtcatgagctgtcg
gtcgcggtccaggcgatgctggacaccctgcgggcccgttatcccgtctcgccgccgccc
gtgcctgatgaggatctagcgtga
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