Cobetia marina: BFX80_14740
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Entry
BFX80_14740 CDS
T04789
Name
(GenBank) hypothetical protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
cmai
Cobetia marina
Pathway
cmai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BFX80_14740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmai03400
]
BFX80_14740
Enzymes [BR:
cmai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BFX80_14740
DNA repair and recombination proteins [BR:
cmai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BFX80_14740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AOM02295
LinkDB
All DBs
Position
complement(3581050..3582900)
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AA seq
616 aa
AA seq
DB search
MLHLGELAQNAAQRLDGEQALLRWWHQALESGHEALDSDSLSQRLESDEGLVRVVTIHKS
KGLEYPIVLLPFMASFRAAEPDRNFGLLTLKQRWLAVADVGGDDQGGDDEEVPARRVNQE
DDALDDSILVKKPSKDMIKEADKARLREDVRLLYVALTRPKFACWLGLAPIGKGGFSKQL
SLPVTAIGYLLGMSDNEEIEASAIEAALRRWCEQQSAGLARVSGLPELPGHDYQPPAERD
QHFHGARHFAGGIEDDWWIASYTALLTDARQVTAALEDTGDAEDDRVPEGATEIALEEGE
QGLTRPDREVAGQSGPLLAGGLPMTVGEIHLHDFPRGPRPGTFLHGLLEAVDLDRLGADD
YRGELERLVGSRLHFGGFDASWQPRLTDWLEQALTRPLQGFEGEPILLNRLEAWQPELEF
WLPAVHARSLPLDAVVTALEPLPRSRPRLAPRRMHGMLKGFIDLTFQSGGRWYVLDWKSN
YLGERPEDYLGESLARAMVEHRYDLQYVLYTLALHRLLKARLGEDYDYERCMGGVLYVFL
RGLDAGGDSPALAVDAEGEAPGMATPGVFQRRPSQALIEALDLWLGGDSSALDSLLLHTT
DTTPLTQSGQQGAFDV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcacctgggggagctggcccagaatgctgcccagcggctcgatggcgaacaggcg
ctgctgcgctggtggcatcaggcactggaatccggccatgaagcgctggacagcgacagc
ctcagtcagcgactggaaagtgatgaggggctggtgcgggtcgtcaccatccacaagtcc
aaggggcttgagtatcccatcgtgctgctgccgttcatggccagcttccgcgccgccgag
ccggacaggaatttcggcctgctgaccctcaagcagcgctggctggctgtggctgacgtg
ggaggtgatgaccagggaggtgatgacgaggaagtgcctgctcggagagtcaatcaggag
gatgacgcgctcgatgacagcatcctggtcaagaagccatcgaaggacatgattaaggag
gctgataaggcaagattaagagaagacgtgcgtctgctctacgtggcgctgacgcgtccc
aagttcgcctgctggctggggctggcgcccatcggcaagggcggcttcagcaagcagctc
agcctgcccgtcaccgccatcggttatctgctcggcatgagtgacaacgaggagatcgag
gccagcgccatcgaggctgccttgcgccgctggtgtgaacagcagtcggccggactcgct
cgcgtgtccggtctgccggagttgcccggtcatgactatcagccaccggcggagcgcgat
cagcacttccacggcgcgcgtcacttcgccggcggtatcgaggatgactggtggatcgcc
tcctacaccgccttgctcacggatgcccgtcaggtgacggcggcgctggaagacaccggc
gatgccgaggatgaccgcgtgcccgaaggcgccaccgagatcgcgctggaagaaggcgag
cagggcctgacgcgcccggaccgcgaggtggcaggccagtccggcccgctgctggcgggc
ggcctgccgatgacggtgggcgagatccatctgcatgatttcccgcgtgggccgcgcccg
gggaccttcctgcacgggctgctggaggcggtggatctcgatcggctcggtgcggatgac
tatcgcggcgagcttgagcggctggtgggctcgcgactgcatttcggtggcttcgatgcc
agctggcagccacgtctcaccgactggctggagcaggcactgactcgtccgctgcagggc
ttcgagggcgagcctatcctgctcaaccgactcgaggcctggcagccggagctggaattc
tggctgccggccgtgcacgcgcgcagtctgccgctggacgccgtggtcaccgcgctggag
ccgttgccgcgctcgcggcccaggctcgcgccacgccgcatgcacggcatgctcaagggc
ttcatcgatctgaccttccagtccggtgggcgctggtacgtgctggactggaagtccaac
tatctgggcgagcgccccgaggactacctcggtgagtcgctggcccgcgcgatggtcgag
caccgctacgacctgcagtacgtgctctacaccctcgcgctgcatcgtctgctcaaggcg
cgcctcggcgaggactacgattacgaacgctgtatggggggcgtgctgtatgtcttcctg
cgcggcctggatgccggcggtgactcacccgcgcttgcggtggacgccgagggggaggcg
cccggaatggcgacgcccggcgtgttccagcgccggccatcacaggcgctgatcgaggcg
ctggatctctggctgggcggtgacagctccgcattggacagcctgctccttcacaccacc
gacaccacgccacttacgcaaagcggccagcagggggccttcgatgtctga
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