Cucurbita maxima (winter squash): 111472317
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Entry
111472317 CDS
T05246
Name
(RefSeq) chromatin structure-remodeling complex protein SYD-like isoform X1
Organism
cmax
Cucurbita maxima (winter squash)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
ResIII
DEAD
DEAD_2
IKKbetaNEMObind
Motif
Other DBs
NCBI-GeneID:
111472317
NCBI-ProteinID:
XP_022973743
UniProt:
A0A6J1IE21
LinkDB
All DBs
Position
Unknown
AA seq
3334 aa
AA seq
DB search
MASAQNVELEAAKFLHKLIQESRDEPAKLATKLYVILQHMKSSGKEHSMPYQVISRAMET
VINQHGLDIEALRASRLPLTGGTQMSDSTTAQYAGSSSVVGTAKDSKMGISGSDTRSGPL
APRKPPVAPSSTDHDYYQGPATHRSGQYFDQGSPSSLDSRSANSQSQEKHDSVSWDKQLN
DKDGKKGTKKRKKVDTSVMEPSSDDTHQPDSRNPSVNPRNAKTNRVEPPAYLVKGGNIEQ
VKHGLSKAAEKHIDPQMYSVNRGDGISTSGEKVLESELPISSTSSVDAAKMIQGTWRNNG
PEMSMLRNPVSREAGKLPVSQVPTSSQSRLPFKEQQLKQLRAQCLVFLAFRNGLMPKKLH
LEIALGNNSPKEEGLHKDVDPRGIAQSFNEARSSSEVMMPSGKLDAARGTGTMIPGAVSA
GRTYEVDSMKEVDNRREEDNKGPLSDYSVQAEVRKPEAELMREKAIFQTFLSTASHPLDF
SSARGSLTANNPLEDLGNSNLLIGQTNQATATVGMRERWKPISGTYDQYHAVMPLRDASV
ISNLAPHDYRNMPESEPRCITEMHKVPSVDEGINGSLNTMEQENDGKSVPSDLPMSRKYT
MSEKWIMDQQKKKLLNEQNWLLKQQKTEKRIATRFDKLKSTVSSSDDISAKTRSVIELKK
LQLLQLQRRLRNDCLNDFFKPISNEMDRLKSFKKHKHGRRIKQLEKFEQRMKEERQKRIR
ERQKEFFGEIEVHKERLDDVFKVKRERWKGFNKYVKEFHKKKERIHREKIDRIQREKINL
LKINDVEGYLRMVQDVKSDRVKQLLKETEKYLQKLGSKLQEAKSTESRFGHDTDDGCDVN
TAEKSEFAIENEDESDQAKHYLESNEKYYLMAHSVKESIAEQPACLHGGKLREYQMNGLR
WLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWESEIN
FWAPSVLKIVYSGPPEERRRLFKERIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIII
DEGHRIKNASCKLNADLKYYRSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQ
WFNKPFQSNGDSSAEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLVR
CEASAYQKLLMRRVEDNLGSIGSTKVRSVHNSVMELRNICNHPYLSHLHAEEVDNLIPKH
YLPPIVRLCGKLEMLDRILPKLKATDHRVLFFSTMTRLLDVMEEYLHWKQYRYLRLDGHT
AGGDRGALIESFNGQNSPYFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDLQAQARA
HRIGQKRDVLVLRFETVQTVEEQVRAAAEHKLGVANQSITAGFFDNNTSAEDRREYLESL
LRECKKEEAAPVLDDDSLNDLLARSEPEIDVFETVDKERREHEMATWKKLVVGHGISEPI
PPMPSRLVTDDDLKEFYEVMKITEEVPKPREGAQVGGVKRKSEYLGGLDTHNYGRGKRAR
EVRSYEEQWTEEEFEKMCKVDSPESPGPKEAVAGESSTSISGPVVGDVLKEELPAASPLP
PVEPMAQHQTPPSRRGRGRPKRAAVDKSPAPVVSPSPSMADDVDTGLQGETISSISKSGG
LDSLPSEGTTYQLAKEISANSQLTTPVPSIIPASESAPACSPAPVQVKGHGRKTQTGQQP
PRRRGKKQGLVPPPVPGSLSSDVCQDDQGKSTNPVASQVNVASDIISNASATQLPSGLPG
SGPSKPVTGPNDQPAVEPVQPRGQSRKTRSAAGAPRRRGKKQVVAAALPNTMAGASLSSN
ADLQMNHIDSSLSTVNQEDKLENKPNKSKETISLSTCGSTMEPQGPTPEQNQNADSRGIS
NVIKEASSGDCASKANPSEHLSKSRAAQDATVTNNRVDETLKSHSLRDTTHPVTSTPETA
VPTCGPPDVSVAVGMSPKAVTDVARETAPISQPIHSSASVASSVQIASQCPPPVYVEPKR
QGRKTAKRVEPSQRRGKKPASLPSVVLDGSAGKESKDLNVLVQPGPLGDSSCKDIGLIGK
TETENQESTNVQNHAGCTQIIDTVDSQDLKRKEQVPKPAQHKQLLASSTKIDATGALDKT
SASGRYQTANVNDVARVMKEVFSGTGLSKAKVGALSEIENKDASAMPVLSKSSMEVTKSH
KSEAILNSNIPVEAHEKEYSVVANEMRPDSANALEESIVPKIDDDNSGCAKADSVNKLVE
SRETYDGCSTAVSGSAISSNFINADHNPPEPSPIFSSLGVSNASKAPEVMDNVLENEANP
VSGGSLKSSPDRSNYKVPSSSKNDGINHPAPSNNMAELPLEEPSECPLDMSSRSHTTVTV
ATTTVENAEISANQAHPSQSKTLDDQRLTSVDCPCEPASDITKETLDVEGFSEPSEFDHT
SLECPATTSMPEMLGQCSIDYSPEKIGMDSGRGDNSKFSFEVPVEFIKASNNTEPYHAAV
ETLKARPARQDCPSVSSGTTENTTMNETVSVRAAVKMEGDLRPVMIVETSTENPGQDCHS
VCQSLSAHRENLEYPDVSNFNESSDSSMPGAEIEVQGRVSVTTMNIESKHKEVNDTDPAV
EQMDAASKQGRSSGSQDLSNAGAPNLVEQTSGNKLEVASEELPTFPSSDHGSVQVLEASA
GSSDGRGYAVEPDLLTPRVEAAECTFKTDFEGQKTSLNDSSNCIPDENLKVSDHVEENAE
FVNPENVPEKSILIPRIQDNEGNQADNHGACLRDMDISNSDAVVQMDVYDEKRVSEGKTG
DMVLPSASLQGGEESCSFTSVGDQVDKLGNQEEPNKFGVKGSPGEKKQSDPLVEYVLGTS
AQSLSSSEVKDSYTMTLLDTNLDNSGDQTDLPVSSSTVTDREKIGDSSKDDSCGCTVTDS
VEALEDSGLLTNEMSDVSVVPASSSQMEPISSPVSLEGPSDYQGSDHMVATQDNIVLSKN
VSSEEDKLRNSFEKTLLDSADPSEDCKESDISSKGQLLSITENLRFNDPSNHLTVSKKLE
ASAGDQTGDVPQTGEVVSVNAADTFTQSAPPTTMEEEKSNALLDSGLIASSSSQPLNDIQ
GSQSDTDPMDSSQAGVVLEKNISGETIVSSSSPVSEEVGADLMQSVAEVQTIDQTDASEV
GEPSLEKAVTEVANPPSSLPAETEIMESSQVPSLIDSAIAVVEAVVRDEADDVLTANERC
QSAGGSSVQDPADSIADVEMVICDQADVPPTGDTAQGAVDTIAICAQIDVPPVCDTAQDP
ADSTTIRDRVDVPSACNAAQGIADTAVECNQVDVPPACNLVQSPTDSATAAAETTISDQV
DVSSSLTLPENESANLDLPPSCSEVEDESIEHRL
NT seq
10005 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgcacaaaatgttgagttggaggcagcaaagtttctgcacaaactaattcaa
gaatctagagacgagccagcaaaattggctacaaaactctatgtgatattgcaacacatg
aagtcaagtgggaaagaacattccatgccatatcaagtaatatcaagagccatggagact
gtcatcaatcaacatggtcttgatattgaagctttgagggcttcacgccttcctctcact
ggtggaactcagatgagtgattctaccactgcacaatatgcgggctcctccagtgttgtt
ggtacagctaaagattccaaaatgggtatatctggaagtgacaccagaagtggcccactt
gctccaagaaagccacctgttgccccaagtagtacagatcatgattactaccaaggacct
gcaactcatcggagtggtcaatattttgatcaaggaagtccttctagtttggattcgagg
tctgccaactcacagtcacaagagaagcatgattcagtgagttgggacaaacaattaaat
gataaggatggtaagaagggcaccaagaagaggaagaaggtggatacatcagttatggaa
ccatctagtgacgatacccatcaacctgattcccgcaatccgtcggttaatcctaggaat
gcgaagacaaatagggtcgaaccaccggcatatctagttaagggaggcaatattgagcag
gtgaagcatggattatcaaaagctgctgaaaagcatattgaccctcaaatgtattctgtg
aacagaggtgatgggatatctacctcgggcgaaaaagttttggagagtgaactacctata
tctagcacatcatcagttgatgctgcgaaaatgattcagggtacatggcggaacaacgga
ccagaaatgagtatgttacgtaacccagtttctagagaagcaggaaagcttcctgtttct
caggttcctacctcatcccaatctcgcttgcctttcaaggaacaacaattaaagcaactt
agggctcagtgccttgtgtttttagcattcagaaatggtttaatgccaaagaaactgcat
cttgaaattgctctcgggaataattctcctaaagaagaggggcttcacaaagatgttgat
cctagaggcattgctcaatcttttaatgaggccagaagttccagtgaagtcatgatgcca
tcaggaaagttggatgctgcaaggggaacaggtacgatgatcccaggcgctgtatctgcc
ggaagaacctatgaggttgactccatgaaggaagtagataatagaagagaagaggataac
aagggtccactttctgattattctgttcaagcagaagtaagaaagccagaagctgaacta
atgcgggaaaaagcaatttttcaaacattcttgagcactgcatcgcatccccttgacttt
tcgagtgcaagggggagcttaactgcaaataaccctcttgaggatttggggaatagcaat
cttctgattggacagaccaatcaagccactgctacagtgggtatgagggagcggtggaaa
cctatctctgggacgtatgatcaataccatgctgtaatgcctttgagagatgctagtgtg
atctcaaatcttgcacctcatgattatagaaatatgccagaatctgaacctagatgcatc
acagaaatgcacaaagtgccatctgtagatgaagggataaatggcagcctaaatactatg
gaacaagaaaatgatggtaagtcagtgccatctgatttgccgatgtctcgaaagtacacc
atgtcagagaaatggataatggatcagcagaaaaagaaactcctaaatgagcaaaattgg
ttactgaaacaacaaaaaactgagaaacgtattgccactcgttttgataagttaaagagt
actgtcagctcatcagatgatatatctgcaaaaactagaagtgtaatagaattgaaaaaa
cttcaactcttgcagcttcagcgtcgcctcaggaatgattgtctaaatgatttcttcaaa
ccaatttcgaatgagatggaccgcttgaaatctttcaagaagcacaaacatggtaggagg
attaaacaacttgaaaaattcgagcagagaatgaaggaggagaggcaaaagagaatacga
gagaggcaaaaggagttctttggtgagattgaagttcacaaggaaagacttgatgatgta
tttaaagttaagagagagaggtggaagggtttcaataagtatgtcaaggagttccacaaa
aagaaggaacgaattcatcgtgagaaaattgacagaatccaacgtgagaagattaatctt
ttgaagatcaatgacgtcgaggggtatctgcgaatggtgcaggatgtgaaatcggatcgt
gttaagcaacttctcaaggagactgagaaatatcttcaaaagcttggatctaagctacag
gaggcgaagtccacagaaagccggtttgggcatgatacagatgatggatgtgacgtgaat
actgctgaaaaaagtgaatttgctatcgagaatgaagatgaaagcgatcaggcaaagcat
tacttggaaagtaatgagaagtactacttgatggctcatagtgttaaagaaagcatagct
gagcagccagcctgccttcatggaggaaagttgagggagtatcagatgaatggccttagg
tggctcgtttcgttatacaacaaccatttgaatggaattcttgctgatgaaatggggctt
ggaaaaactgttcaggtaatttccctgatctgttatttaatggagactaagaacgatcga
ggtccatttttggtggttgtaccgtcatcagttttacctggatgggagtcagagatcaac
ttctgggccccaagtgtgcttaaaattgtgtattctggacctccagaagagcggcgcaga
ctattcaaggagagaattgttcatcagaagtttaatgtacttctgaccacatatgagtat
ctgatgaacaaacatgataggccaaaattaagcaaaattcattggcactatattataatt
gatgaaggccatcgcataaagaatgcttcatgcaagttgaatgctgatctgaagtactac
cgtagttctcacagattactcttgaccgggacaccgctacagaacaaccttgaggagctt
tgggcattactgaactttttgttgccaaatatttttaattcatcagaggatttttctcag
tggttcaacaaaccattccagagtaatggtgatagttcagccgaagaagccttgctttct
gaagaggagaatcttttgatcataaatcgacttcaccaagttcttcgcccgtttgttctt
cggaggcttaaacacaaggtggaaaatgaactgccagaaaagattgaaagacttgtaaga
tgtgaggcttctgcatatcagaaacttttgatgaggagagtagaggataaccttggttca
ataggaagtacaaaggtccgatcagtgcataactcggtgatggagctgcgtaatatttgt
aaccatccttatctaagccatcttcatgcagaggaggttgataatttgatacctaagcat
tacctgccgccaattgttaggctctgcggaaagcttgagatgttagatagaatattacca
aagctaaaagcaactgatcatcgggttctcttcttttccaccatgactaggctgctcgat
gttatggaggaatatcttcactggaaacagtatcgatatctacgattggatggacataca
gccgggggagatcgtggtgctctcattgagtcatttaatgggcaaaattctccctatttt
atattccttcttagcattcgagctggtggtgtgggagtgaatctccaagctgctgacaca
gtgattatttttgacacagactggaacccacaggttgatctacaggcacaggcaagagct
cataggatcggccagaagagggatgtgcttgttcttagatttgaaacagttcaaacggtg
gaagaacaagtgagagctgctgcagagcataaacttggagtggctaaccagagtattaca
gccggcttttttgacaacaatacaagtgctgaagatcgaagggaatatttggaatctctt
ctacgcgagtgtaagaaagaagaagctgcacctgtactagatgatgattctctgaatgat
ctcttagcacgcagtgagccagagattgacgtgtttgaaacagtggacaaagaacgacga
gagcatgagatggccacatggaagaagctggttgttggtcatggaatttctgagcctatt
cctcccatgccttcacgtcttgtaacagatgatgacttgaaagaattctatgaagtaatg
aagataactgaagaagtaccaaaacctagggagggagcccaagtcgggggggtaaagagg
aagagcgaatatcttggaggtctcgacacccataattatgggagggggaagcgggcaaga
gaggtgcgatcctatgaagaacagtggacagaagaggagtttgaaaagatgtgcaaggtt
gactcgcctgaatccccggggccaaaggaagctgtagcaggagaatcgtcaaccagtatt
agtgggccagttgtaggagatgttttgaaggaagaacttcctgctgcctcccctttgcct
cctgttgagcctatggctcagcatcaaacaccaccctcaaggcgaggtcgtggaagacca
aaaagagcggctgtcgataagtcgcctgctccagtggtttctccatctccttccatggca
gacgacgtggacacagggttgcaaggagaaactatttcaagcatttctaaaagtggcggt
cttgattctttgcctagtgaaggaacaacttatcaacttgctaaagagatttctgcaaat
tctcagttaactacccctgtgccttctataattcctgcctctgagtcggcaccagcttgc
tctcctgcaccagttcaagtgaaaggtcatggtcgaaaaactcaaactggacaacaacct
cctagaagaagggggaaaaaacaggggctggtcccacctcctgttcctggtagcctatcc
tctgatgtatgtcaagatgaccagggtaaatccacaaacccagtggcaagtcaagttaat
gttgcaagtgacattatttctaatgcgtctgccacccagcttccctctggtttacctggt
tctggcccttcaaaacctgtcactggacctaatgatcaaccggctgttgagcctgtacag
cctagaggacaaagtcggaagacgcgaagtgcagctggagcaccacggcgtagaggaaag
aaacaagtagtagcagctgcattgcccaacaccatggcgggtgctagtctaagttcgaat
gcagatttgcaaatgaaccatattgattcttctttgagtactgtcaatcaggaagataaa
ctggaaaataagcccaataagagcaaggagacaatcagcctatcaacttgtggtagtacc
atggaaccacaagggcctactcctgaacaaaaccaaaatgctgattctcgtggaatttct
aatgtgatcaaggaggcttcttctggagattgcgcgtccaaagcaaacccttctgagcac
ttgagtaagagtcgtgcggcccaggatgcaactgtaacaaataatcgtgttgatgaaaca
ctgaagagtcatagcttgcgagacacaactcatccagttacatcaactccagaaactgca
gttccaacatgtggtcctcctgacgtttctgttgctgtcgggatgagtcccaaagctgta
acagatgttgctagagagactgctcctatttcccagccaattcattcgtccgcatcagtg
gcttcaagcgtgcaaattgcatctcaatgtccaccacccgtatatgtggaacctaaacgg
caaggtcgtaagactgctaaaagggtagagccctctcagcgtaggggaaaaaaaccggcc
tcattgccttctgtcgttcttgatggttcagctggcaaggaatctaaagatttgaatgtg
cttgtgcaaccagggccattgggggattcaagttgtaaagacataggcctaataggtaaa
actgagactgagaatcaagaatcaaccaatgttcagaatcacgcaggttgtacccaaatt
atagatactgtggattcccaggatctgaaaagaaaggagcaagtacccaaacctgctcaa
cataaacagcttttggcatcatcaacaaagattgatgctactggagccttggacaagacc
tctgcatcaggccgttatcaaactgcaaatgtaaatgacgttgctcgggtaatgaaggaa
gtcttctctgggactggcttgtcaaaagctaaagttggagcgttgtctgagattgaaaac
aaggatgcttctgcgatgcctgttttgagcaagtcctctatggaggtgaccaaaagtcat
aaatcagaggctattttaaattccaacattccagttgaggcccatgaaaaagaatattca
gttgtagctaatgaaatgagaccagattctgcaaatgctttagaagaatctatcgttccg
aagatcgatgatgacaattctggatgtgcgaaggctgattcagtaaataaattggttgaa
tcaagagaaacatatgatggatgctcaactgcggttagtggctctgcaatttcatcaaac
ttcatcaatgctgatcataatcccccagaaccctcgcctattttctcaagtctgggtgtt
tccaatgcatcaaaggctcctgaggtgatggataatgtattggaaaatgaagcaaaccct
gttagtggaggatctttaaaatcttctcctgatagaagcaactacaaagttccctcgtct
tcgaagaacgatggaataaatcatcctgctccttcgaataacatggcagaactgcctttg
gaagagccttcagaatgccctcttgatatgtcaagtagatctcatactacagtgaccgtt
gccacgactactgttgaaaatgcagaaatttctgctaaccaagctcatccaagtcaatcg
aaaactcttgatgatcaaagactaacttctgtggactgtccctgtgaaccggcctctgat
atcacaaaggaaactcttgacgtggagggattctcagaaccatcagaatttgatcataca
agtcttgaatgtcctgcaaccacatccatgcctgaaatgttgggtcaatgttcgattgac
tactctcctgagaagataggcatggattctggcagaggtgataattctaaattttctttt
gaagttccagttgaatttatcaaggcatctaacaacacagaaccttatcatgcagctgtt
gaaactttaaaagcaagacctgcgaggcaagattgtcccagtgtatcttctggtacaaca
gagaatacaacgatgaacgaaacggtgtctgttcgtgctgcagttaagatggaaggtgat
cttagacctgttatgattgttgaaacttcgacggagaatcctggtcaagattgtcatagt
gtctgtcaaagtctctcagctcatcgtgaaaatctcgaatatccagatgtttcaaatttt
aatgagagttccgactcaagtatgccaggtgctgaaattgaagttcaagggcgtgtttct
gtaactactatgaatattgagagtaaacataaagaagtgaatgatactgatcctgctgtt
gaacaaatggatgctgcctcgaagcaggggaggtctagtggtagtcaagatctttcaaac
gcaggtgcacctaatctggtggagcaaacatcgggaaataaattagaggttgcttcagaa
gaattgccaacttttccttcatctgatcatggaagcgttcaagtcctcgaagcttctgct
ggaagttctgatggtagaggttatgctgtggagcctgatttgctaactcctagagttgag
gctgcggaatgcactttcaaaactgattttgaaggtcagaaaacatcattaaatgatagt
agtaattgtattccggatgagaatttgaaggtatcagatcatgtcgaagaaaatgccgaa
tttgttaatcctgagaatgttcctgagaaaagcattctgattcctcggattcaggataat
gaaggtaaccaagctgacaaccatggtgcatgtctcagggatatggatatctccaattct
gatgctgttgttcaaatggacgtttatgacgaaaaacgtgtatcagaaggtaaaactggt
gatatggttctgccatcagcttcattgcagggaggggaagaaagttgttctttcacatct
gtgggagatcaagttgataagttagggaatcaggaggaacccaacaaatttggagttaaa
gggtctcctggggagaaaaagcaatccgatcctctagtcgagtatgttcttggaacttcg
gcacaatctttatcttcttccgaagttaaggattcgtatacgatgacattgcttgataca
aatttagataattcaggtgatcaaactgatttacctgtatcctcgtccacggtgacagac
agagaaaagattggggattcttccaaggatgattcgtgtggctgcacggtcacagattca
gtagaagctctcgaggatagtggattattaacaaatgagatgtcggatgtttcggttgtg
cctgcttcatcgtctcaaatggaacccattagctccccagtctctctggaggggccaagt
gattatcaaggtagtgaccatatggttgcaacacaggataacattgttttgtccaaaaac
gtatcgtctgaggaagacaagctgcgaaactcgttcgagaaaaccttattagatagtgca
gacccgtcggaggattgtaaggagtctgatattagcagcaagggacagcttttaagcatc
actgaaaacctccgcttcaatgatccttccaatcatctaacggtatcaaagaagttggaa
gcttcagctggtgatcagacaggggatgttccgcaaacaggggaggttgtatcagtaaat
gcagctgatacctttactcagtccgcacctccaacaaccatggaagaagaaaagtccaat
gccttactcgacagtggtctaattgctagctcatcatcacagccactgaacgacatacaa
ggttctcagtccgatacagatccaatggattcttctcaagctggtgtggttttagaaaag
aatatatcaggagaaacaattgtgtcttcgtcttctccggtttcagaggaggtaggagca
gatctaatgcaatctgttgctgaagttcagacgattgaccaaaccgatgcatctgaggtg
ggggagccttctctagagaaggctgtaacagaagtagccaatcctccatcctctctacct
gctgaaactgaaattatggaaagctcacaagttccaagtttgatcgatagcgccattgca
gttgtagaagcagtcgtacgcgacgaagccgatgatgtactcacagcaaatgaaaggtgc
cagtcagcaggtggctcatcagtgcaggatccggctgatagcattgcagatgtagaaatg
gtcatatgtgatcaagctgatgttcctccaaccggtgacacggcacagggtgcagttgat
acaatagccatatgtgctcaaattgacgtacctccggtttgtgatacggcgcaggatcca
gcagatagcactactatacgtgatagagtcgatgtaccttcagcttgcaatgcagcacag
ggtatagctgatactgctgttgaatgtaatcaagtcgatgtacctccagcttgcaacttg
gtccagagtccgactgatagcgccactgcagctgcagaaactaccataagcgatcaagtc
gatgtttcctccagtttgactctgccagaaaatgaatctgcaaatttggacctgcctcct
agctgttcagaagtagaggacgaaagcatcgagcaccgactgtag
DBGET
integrated database retrieval system
