Cucurbita maxima (winter squash): 111476570
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Entry
111476570 CDS
T05246
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111476570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111476570
03041 Spliceosome [BR:
cmax03041
]
111476570
03036 Chromosome and associated proteins [BR:
cmax03036
]
111476570
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
111476570
Spliceosome [BR:
cmax03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
111476570
Complex B
111476570
Complex C
U2 SnRNP specific factors
111476570
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
111476570
TFTC complex
111476570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
111476570
NCBI-ProteinID:
XP_022976058
UniProt:
A0A6J1IL02
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MYLYNLTLQRATGIVSAINGNFSGGKTQEIVVARGKVLDLIRPDDSGKIQTLLSVEIFGA
IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKDKNVFDKIHQETFGKSGCRRIVPGQYL
AVDPKGRAVMIGACEKQKLVYVLNRDTVARLTISSPLEAHKSHTIVYSICGIDCGFDNPI
FAAIELDYSEADQDFTGVAASEAQKHLTFYELDLGLNHVSRKWSEPVDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRADLPAERGVLIVSASMHKQKTMFFFLLQ
TEYGDIFKVTLEHNNDSVKELKIKYFDTIPVTASMCVLKSGFLFAASEFGNHSLYQFQAI
GDDADVESSSATLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPIMDMKVINLFEEETPQ
IFTLCGRGPRSSLRILRPGLAISEMAVSELPGVPSAVWTVKKNINDEFDAYIVVSFANAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR
TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDNTIRILSLDPDDCMQILSVQSVSSAPESLLFLEVLASVGGEDGADHPASLFL
NAALHSGVLFRTVVDMVTGQLSDSRSRFLGLRAPKLFSVILRGRRAILCLSSRPWLGYIH
QGHFLLTPLSYETLEYASSFSSDQCAEGVVAVAGNFLRVFTIERLGETFNETVIPLRYTP
RKFVLHPRRKLLVLIESDQGAFTAEEREAARKECFEAAGTGENGNGKMEMENGGDDEDKD
DPLSDEHYGYPKAESEKWVSCIRVLDPRSATTTCLLELQDNEAAFSVCTVNFHDKEYGTL
LAVGTAKGLQFFPKRSLVAGYIHIYRFLEDGKSLELLHKTQVEGVPLALAQFQGRLLAGI
GSVLRLYDLGKRRLLRKCENKLFPNTIVSIQTYRDRIYAGDIQESFHYCKYRRDENQLYI
FADDSVPRWLTASYHVDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLN
GAPNKVEEIIQFHIGDVVTSLQKASLIPGGGECILYGTVMGSLGALHAFTSRDDVDFFSH
LEMHLRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPLDLQRKIADELDRTPGE
ILKKLEEVRNKII
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgtatctttacaacctcactttgcaacgagcaaccgggattgtttcggctataaatgga
aatttctccggtgggaaaacgcaggagatagttgtggccagagggaaggtcctggatctc
attcgtcccgatgatagtggtaagatccaaactctgctttccgttgaaatttttggtgcg
attcggtctttagctcaattcaggcttactgggtctcagaaagattatattgttgttggg
tctgattcgggtcgaattgtcattctcgagtacaataaggataaaaatgtgtttgataag
atacatcaggagacttttgggaagtctggttgtcggcggattgttccggggcaatatttg
gccgttgatcctaaagggagggctgttatgattggggcttgtgagaagcagaagctcgtt
tacgtgttgaatagagatactgtagcgaggcttactatttcttcgccactggaggctcac
aagtcacatacgattgtctattcaatttgtggaattgattgtggatttgacaacccaata
tttgctgcaattgagttggattactcggaggcagatcaagattttactggggtggctgca
agtgaggcccagaagcatttaactttttatgaacttgatcttggtctaaatcatgtttct
aggaagtggtcagaacctgttgataatggtgcgaatatgctagttactgttcctggtggc
ggagatggtccaagtggagtgttagtttgtgctgaaaactttgttatttataagaatcag
ggacatccagatgtgagagctgtcattcctaggcgtgcagacttacctgctgaacgtggt
gtgcttattgtttcagcatctatgcataagcaaaaaacaatgtttttctttcttttacag
acagagtatggagatatttttaaggttactttggaacacaacaacgacagtgtcaaagaa
ctgaagattaagtatttcgatacaattcccgttacagcttcaatgtgtgtgttgaaatct
ggattcctatttgctgcctcagaatttgggaatcactctctataccagttccaagcgata
ggggatgatgctgatgttgagtcttcctctgctactctgatggaaactgaagaaggtttt
cagcctgtctttttccagcctaggaggcttaaaaatcttgttagaattgatcaagtagag
agtttaatgcctataatggacatgaaagtcataaatctttttgaggaagaaacaccccaa
atatttactctctgtgggcgtgggcctcgatcatctctgcgaatattgagacctggttta
gccatcagtgaaatggccgtgtcagaacttcctggtgtccctagtgccgtttggactgtg
aaaaagaacatcaacgacgagtttgatgcatacattgttgtgtcatttgcgaatgcaaca
cttgttctttccattggtgagacagttgaagaagtcagtgatagtggatttcttgacact
accccttcccttgctgtttctttgataggtgacgattcacttatgcaagtccatccgaat
ggcattaggcatattagggaagatgggcgtattaatgaatggagaactccaggtaagagg
accattgttaaggttggctctaataggcttcaagtggtgattgccctgagtgggggagaa
cttatttattttgaggtagacatgactggtcagttgatggaagtggaaaagcatgaaatg
tctggagatgttgcctgtttggacattgccccagtacctgaagggagacaacgttctcgt
ttcttagcagttggttcttatgacaacacaatacgaattctatcactggatcctgatgac
tgtatgcagattttaagtgtgcaaagtgtttcttcagctccagaatctctcctatttctt
gaagttctggcatcagtaggtggggaggatggtgctgatcatcctgctagccttttctta
aatgctgctttgcattctggggttttattcagaacagtagtagatatggtgacaggtcag
ctctctgattcccgatcccggttcttaggtctaagagcacccaaactgttttctgttatt
ttgaggggtaggcgtgcaattctttgcctctcaagtagaccttggcttggttatattcat
caagggcattttcttttgacgcctctatcatatgaaactcttgaatatgcttcctctttt
tcgtcggatcagtgtgctgaaggtgtggttgctgtagcaggaaatttcttgagggtattt
accattgagagattgggagaaacatttaatgaaacagttattccgctcaggtacactcca
aggaagtttgtgcttcatcctaggagaaaactattggttttaattgagagtgatcaggga
gcattcactgcagaagagcgagaagctgctagaaaagaatgttttgaggctgcagggact
ggagaaaatgggaatggcaaaatggaaatggagaatggaggagatgatgaggataaggat
gatcctttatccgatgagcattatggttacccaaaggcagagtccgaaaaatgggtttct
tgcatccgagttcttgaccctcggtcggccactacaacttgtctgctggagcttcaagac
aatgaagcggcattcagtgtttgtactgtgaatttccatgacaaggaatatggaactctt
ttagctgttggtactgcaaaagggctgcagtttttccctaaacgaagtttagttgctgga
tatattcatatttatcgttttctagaggatggaaaatccctcgagcttttgcacaagaca
caagtggaaggtgttcctctcgctttagctcagttccagggaagattactagcggggata
ggatctgtgctcagattgtatgatttggggaagagaagattgcttaggaagtgtgaaaat
aagttattccctaatacaattgtgtccattcagacatatcgtgatcgaatttatgctggt
gacattcaggagtcattccattattgcaagtacaggcgggatgaaaatcaactgtacata
tttgcggatgattctgttcctagatggcttacagcatcataccatgtggattttgatacc
atggctggtgctgataagtttggaaatatctattttgtgcggttaccacaagatgtctca
gacgagattgaagaagacccaacaggtggaaagataaaatgggagcagggaaagcttaac
ggggcacctaacaaagtcgaggagatcatacagtttcatattggtgacgtggtcacatca
ttgcagaaagcgtctttgattccagggggtggagaatgcattttgtatggtacagtgatg
ggaagcttgggggcattgcatgctttcacctcccgtgatgatgttgatttcttttctcac
ttggagatgcatttgagacaggaacatccacctttatgtggaagagatcacatggcttat
agatcggcttattttcctgttaaggatgtgattgatggggatctgtgcgagcagttccca
accctccccctggatttgcagagaaaaattgccgacgaattggaccgaactcccggagaa
atactgaagaagcttgaagaagtacgaaataagatcatttaa
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integrated database retrieval system
