Cucurbita maxima (winter squash): 111481623
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Entry
111481623 CDS
T05246
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03013
Nucleocytoplasmic transport
cmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111481623
03015 mRNA surveillance pathway
111481623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111481623
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111481623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
111481623
NCBI-ProteinID:
XP_022982922
UniProt:
A0A6J1IXW1
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MADPAAPDSTTSNASSAASADAATTPPVVTPVPKRAWGDEEDDDVGDAGDSSSAPSEYME
SLKIQDEKTLEEPEDSNITAVTTGDTPYSSASTFEDLNLSPEILKGLYVEMKFQKPSKIQ
AISLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDVNLKAPQAFCICPTRELAMQNI
EVLKKMGKYTGITSECAVPADSANYVPMSKRPPITAQVVIGTPGTIKKWMSSRKLGVSCV
KILVFDEADHMLSEDGFRDDSLRIMRDIEKSSPHCQVLLFSATFDETVKNFVSRVVKDYN
QLFVKKEELSLEGVKQYKVICPDELAKIRVIKDRIFELGEKLGQTIIFVRTRNSASMLHK
ALVDYGYDVTTIQGALTTEHRDKIIKEFKDGLTKVLISTDLLSRGFDQQQVNLVINYDLP
LKYESSSEAMKFRSSSQSEPNYEVYLHRIGRAGRFGRKGAVFNLLCGDVEMMRMDKIQNH
FNSEVTEVRDSDEDIQAALKTAGLL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccggcggccccagactctaccaccagcaacgcctcttccgccgcctccgcc
gatgctgctactaccccacccgtagttacaccagttcctaaacgtgcttggggcgatgaa
gaagacgatgatgtaggcgatgctggagattcatcctctgcgccttccgagtacatggaa
tctcttaaaatccaagacgaaaaaactcttgaagaacccgaagactctaacatcacagcg
gtgacaactggtgatactccatattcatcagccagtacttttgaggatctgaatctatct
ccagagattttgaaggggttgtatgttgagatgaaattccaaaagccaagtaaaattcaa
gctataagtctacctatgatcttgactcctccgtacaaagatttaatagctcaagcacac
aatggttctggaaaaactacttgttttgtgcttgggatgttgagtcgcgttgatgtgaac
ttgaaggctcctcaggcattttgcatatgtcctacaagggagttagccatgcagaatatt
gaagttcttaagaaaatgggaaaatacactgggataacttcagagtgtgcagttcctgct
gacagtgctaactatgtacctatgtcaaagcgaccaccaataactgcacaagttgtgatt
ggaactcctggcacaataaagaaatggatgtcatcgaggaagctgggagtaagttgcgtg
aagattcttgtttttgatgaggctgatcatatgcttagcgaggatggctttagggatgat
tcgttgagaatcatgagggacattgagaaaagtagccctcattgccaggtgcttctgttc
tctgctacattcgatgagactgttaaaaactttgtctctagggttgtcaaagactacaac
caactttttgttaagaaggaagaactatccctggagggtgtgaagcaatacaaggtgata
tgtccagatgaattagcgaaaattcgggtcataaaagataggatttttgaacttggagag
aaattgggtcagacaattatatttgtgcgcacaagaaacagtgcaagcatgttacataag
gcactggttgattatggttatgatgtgactaccattcaaggggcactgacgactgaacat
agagacaaaataataaaagagtttaaggatggtttgaccaaagttctcatttcgactgac
cttctatctcgagggtttgaccagcaacaggtcaatctagttatcaattatgatcttcct
ctgaaatatgaatcttcttcagaagcgatgaaattcagatcttcctcacaatctgagcct
aactatgaggtgtacctccatagaattggtcgggcaggtcgttttgggcgcaagggagct
gtgtttaacttgctctgtggtgatgtggagatgatgcgaatggacaaaatccagaaccat
tttaactctgaagtaacagaggttcgggactctgatgaggacattcaagcagccttgaaa
actgctggattgctttga
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