Cucurbita maxima (winter squash): 111488788
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Entry
111488788 CDS
T05246
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111488788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmax04121
]
111488788
Ubiquitin system [BR:
cmax04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
111488788
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
F-box
F-box-like
LRR_8
Motif
Other DBs
NCBI-GeneID:
111488788
NCBI-ProteinID:
XP_022992469
UniProt:
A0A6J1JXM2
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MLKMVSAFPEDVLEHVFSFIQCHKDRNSISMVCKSWYEIERRCRKRVFVGNCYAVSPRIV
TRRFPKVRSVELKGKPHFADFSLVPDGWGGYVYPWIVAMASAYPFLEEIKLKRMVVTDES
LELISKSFKNFKVLVLMTCEGFSTDGLAAIAANCRNLEVLDLRESDVEDLNGHWLSHFPE
TYTSLVSLNFACLGSEVSISALERLVDRCPNLQTLRLNRPVPLDRHASLLRRAPQLAEFG
AGCYTADLRSEVFSNLTGAFTSCTELKSLSGFWDVVPAYLPSVYPTCSRLTFLNLSYAII
QCDDLTKLITQCHNLQKLWVLDYIEDSGLEALAGICKDLRELRVFPSEPYGPEPNVSLTE
QGLISVSEGCPKLQSVLYFCRQMTNVALLIIARNLPNMTRFRLCIMEPRTPDYITNQPLD
VGFGAIVGYCKNLQRFSLSGLLTDQCFEFIGTYGKKLEMLSVAFAGNSDLGLHHVLSGCD
SLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLAQKFPQLNVEVIDER
GPPNTRPESCPVERLYIYRSVAGRRSDMPGFVWTMDGDAPLRLT
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaatggtgagcgcgtttccagaggatgtgttggagcatgtgttttcgtttata
cagtgtcataaggacaggaactcgatctccatggtgtgcaagtcgtggtatgagattgag
agacggtgtaggaagagggtttttgttgggaactgctatgcggtgagtcctcggattgtg
accaggcggtttccgaaggtgagatctgtggagctcaaggggaaaccgcactttgcggac
tttagtttggtgcctgatggttggggtgggtatgtttatccttggatcgttgctatggct
tctgcttatccttttctggaggagatcaagttgaagagaatggtggttacggatgagagt
ttggagctcatttccaagtcttttaagaattttaaggttcttgtgttaatgacatgcgag
gggttcagtacggatgggcttgcggccattgctgccaattgcaggaatttggaagtattg
gacttacgagagagtgatgtggaagatctaaatgggcactggctcagccattttcctgaa
acctatacctcactggtatccctcaattttgcttgtttggggtcagaggtgagtatttct
gcattggagcgtcttgtggataggtgtccaaacttacagacactgcgcctcaatcgtcca
gttccccttgatcggcatgccagtctacttcgtcgtgcacctcagctggctgagtttggc
gctggatgctacacagctgacttgagatcggaagttttttcgaacttaactggggcattt
acaagctgtactgaattgaagagtctatcgggattttgggatgttgtccctgcatacctt
ccttccgtttatccaacttgctctaggcttacattcttgaacttgagctacgctataatt
caatgtgacgatcttaccaagcttatcactcagtgtcataatttgcagaagctttgggtg
ctggattacattgaagattctggccttgaggcccttgcaggtatctgcaaggatcttcga
gaattaagagtgtttccatccgaaccatatgggccggaaccgaatgtgtctttgacagaa
cagggtcttatctctgtttctgaagggtgtccaaagctccaatctgttttgtacttctgt
cgtcaaatgacaaatgttgccttattgatcattgccaggaatcttccgaacatgacccgt
tttcgtctatgtattatggagccacgaactcccgattacatcacgaatcagccgcttgat
gtaggctttggtgccattgttgggtattgcaaaaatctccagcgtttttccctttctggc
cttctgacagatcaatgtttcgagtttataggaacttacggtaagaagctagagatgctg
tctgtggcatttgctggtaatagtgatttaggacttcatcatgtgttgtctggatgtgat
agtcttcgcaagctggagattagggactgtccttttggtgataaagctcttttggccaat
gctgcaaagctcgagacaatgcgatccctttggatgtcttcttgctctgtgagttttgga
gcatgcaaattgttagctcagaagtttccccaactcaatgtcgaagttatagacgagagg
ggtcccccaaatacaaggcctgaaagttgccctgtggagagactttacatataccggagt
gtcgccgggcgtcggtccgatatgcctggttttgtatggacaatggatggagatgctcct
ctaaggcttacttga
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