KEGG   Cucurbita maxima (winter squash): 111493081
Entry
111493081         CDS       T05246                                 
Name
(RefSeq) ubiquitin receptor RAD23b-like
  KO
K10839  UV excision repair protein RAD23
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03420  Nucleotide excision repair
cmax04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111493081
  09124 Replication and repair
   03420 Nucleotide excision repair
    111493081
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:cmax03051]
    111493081
   03400 DNA repair and recombination proteins [BR:cmax03400]
    111493081
Proteasome [BR:cmax03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    111493081
DNA repair and recombination proteins [BR:cmax03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      111493081
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD CUE UBA_3 TECR_N Dsc3_N Rad60-SLD_2 MCM_N Med13_C
Other DBs
NCBI-GeneID: 111493081
NCBI-ProteinID: XP_022998454
UniProt: A0A6J1KED6
LinkDB
Position
Unknown
AA seq 387 aa
MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA
ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQNPPVAQPIINSTPPTQVAPSPTPAAQAP
APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV
VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDGSLPAPASGAPNTAPL
NMFPQALPAGGGSGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL
RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV
IEAFLACDRNEELAANYLLENSGDFDD
NT seq 1164 nt   +upstreamnt  +downstreamnt
atgaagctcactgtgaagaccctcaagggaagccacttcgagattagggttcagcccacc
gacaccgtgatggctgtcaagaaacatattgaagatatacaaggaaaggctaattatcct
tgtggtcagcaattattgatacacaatggtaaagttctaaaagatgaaactacgctggca
gaaaacaaagtatctgaagagggtttcctagttgtcatgctcagcaagagcaaaacgtct
ggctcagcagggcagtcatcgactcagcctgctcaaaacccacctgtagctcaaccaatt
ataaattcaactcctcctacccaagttgcaccatcaccgactcctgcagctcaagctccc
gcaccagccccgccgtctgcccctaagaacactacatctacttcagacagggcgacagat
aatgtgcaaacagatacgtacggtcaagctgcttcaaatttggtcgctggtaataacctg
gaagagaccattcaacaaataatggatatgggaggtggcaactgggacagagaaacagtt
gttcgtgcactaagagctgcatacaacaatccagagcgtgcagtggattacttgtactcc
ggtatcccggaatctgcagaagttgcagtaccagtgggtcgttttggttctggtcaagcc
actggaactgatggatcccttcctgcacctgcctctggagcacccaacacagcccccttg
aacatgtttcctcaggcacttcctgctggtggcggcagcggtggcggcggtaatcttgga
tctcttgaattccttagaaacaatccacagtttcaagccttgcggacgatggtgcataca
aaccctcaaatcttacagcccatgcttcaagaacttggaaagcagaatccccagcttttg
agactcattcaggatcatcatgcagagttccttcagttaattaacgaacctgtcgataat
tttgagggagagatgtttgaacaggctgacccggacatgcctcatgccattaacgttact
ccagccgaacaggcagccatcgaacgactcgaggcgatgggattcgatagagccttagtc
atcgaggcatttttggcgtgtgatcgcaacgaggaactagcagctaactacttactggag
aattctggagattttgatgactaa

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