Clavibacter nebraskensis: CMN_01855
Help
Entry
CMN_01855 CDS
T02530
Name
(GenBank) long-chain-fatty-acid-CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
cmc
Clavibacter nebraskensis
Pathway
cmc00061
Fatty acid biosynthesis
cmc00071
Fatty acid degradation
cmc01100
Metabolic pathways
cmc01212
Fatty acid metabolism
cmc02024
Quorum sensing
Module
cmc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cmc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CMN_01855
00071 Fatty acid degradation
CMN_01855
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CMN_01855
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cmc01004
]
CMN_01855
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmc04147
]
CMN_01855
Enzymes [BR:
cmc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CMN_01855
Lipid biosynthesis proteins [BR:
cmc01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
CMN_01855
Exosome [BR:
cmc04147
]
Exosomal proteins
Exosomal proteins of breast milk
CMN_01855
Exosomal proteins of breast cancer cells
CMN_01855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AraC_N
Motif
Other DBs
NCBI-ProteinID:
CCE75800
UniProt:
M5BB75
LinkDB
All DBs
Position
1951646..1953472
Genome browser
AA seq
608 aa
AA seq
DB search
MEQHTMPAVVEARPDDNITDVLVHRVRTSPDAPLFALPDGSGGWTDVSASEFHRQVVALA
KGLVAAGIEPGERIGMMCRTRYEWTLVDFAVFFAGAVLVPVYETSSPGQVHWNLQDSGSV
AVILESAEHFSRFDEVHPELPAVRRVWQIDLGDLDKLAEQGVGVPDAEIERRRNIAVGSD
MATLIYTSGTTGRPKGCILTHANFVELARNAEVAMEEVVQVGASTLLFITTAHVFARFIS
ILNVQAGVKTGHQADTTQLLPALASFKPTFLLAVPRVFEKVYNSSEQKAEGAGRGKIFRK
AAEVAYAHSVAVDAGSVPLALKLQYKLFDALVYSKIRQAMGGRVRFAVSGSAPLGLRLGH
FYRSLGLTILEGYGLTETTAPVSVNLVKGFRIGTVGPAMPGVATRITDEGEIQVKGVNVF
DGYWQDAEATAAVFDDGWFRTGDLGSYDADGYLTITGRKKEIIVTAGGKNVAPAALEDPI
RANPLVGQVVVAGDRRPFISALITLDPEMLTVWLANNGQDPALTLEQASQNPAVLAEVQR
AVDAANATVSRAESIRKFVVLPVELTEAAGHLTPKLSIKRQVVLEAFADVITRIYEAAPT
TEGHSLVH
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtggaacagcacaccatgcccgccgtcgtcgaggcgagacccgacgacaacatcaccgac
gtcctggtgcaccgcgtgaggacgagcccggacgctccgctgttcgcgctgccagacggg
tcgggcgggtggaccgacgtctcggcgtccgagttccaccgccaggtcgtcgccctcgcg
aagggcctcgtggccgcgggcatcgagccgggcgagcgcatcggcatgatgtgccggacg
cgctacgagtggacgctcgtcgacttcgcggtgttcttcgccggcgccgtcctcgtcccc
gtgtacgagacctcctcccccggccaggtgcactggaacctgcaggactccggcagcgtg
gccgtgatcctcgagtccgccgagcacttctcgcgattcgacgaggtccacccggagctg
cccgcggtccgccgcgtgtggcagatcgacctgggcgacctggacaagctcgcggagcag
ggcgtcggcgtgccggacgccgagatcgagcgccgccggaacatcgcggtcggctcggac
atggcgaccctcatctacacgtcgggcaccaccggccggccgaagggctgcatcctcacg
cacgcgaacttcgtcgagctcgcgcggaacgccgaggtcgcgatggaggaggtcgtgcag
gtcggcgcctcgacgctgctgttcatcaccaccgcgcacgtgttcgcgcgcttcatctcg
atcctcaacgtgcaggcgggcgtgaagaccgggcaccaggccgacacgacgcagctcctg
cccgcgctcgcgtccttcaagccgacgttcctgctcgcggtcccgcgcgtcttcgagaag
gtctacaactcctcggagcagaaggccgagggtgcggggcgcgggaagatcttccgcaag
gcggccgaggtcgcgtacgcgcactcggtcgcggtcgacgccggctccgtgccgctcgcg
ctgaagctccagtacaagctcttcgacgcgctcgtgtactccaagatccggcaggcgatg
ggcgggcgcgtgcgcttcgcggtcagcggatccgcgccgctcggcctccggctcgggcac
ttctaccggtcgctcggcctcacgatcctcgagggctacgggctcaccgagaccacggcg
cccgtgagcgtcaacctcgtgaagggcttccgcatcgggacggtgggcccggcgatgccc
ggcgtggccacccgcatcaccgacgagggcgagatccaggtcaagggcgtcaacgtcttc
gacgggtactggcaggacgcggaggcgaccgcggccgtcttcgacgacggctggttccgc
acgggcgacctcggcagctacgacgccgacggctacctgacgatcacgggccggaagaag
gagatcatcgtcaccgccggcggcaagaacgtcgcgccggccgcgctcgaggatcccatc
cgcgccaacccgctcgtcggccaggtcgtggtggccggcgaccggcggccgttcatctcg
gcgctcatcacgctggatccggagatgctcacggtctggctggccaacaacgggcaggac
cccgccctgacgctcgagcaggcgtcgcagaacccggcggtgctcgccgaggtgcagcgc
gcggtggacgcggccaacgcgacggtgtcgcgcgccgaatccatccgcaagttcgtcgtg
ctgccggtggagctgacggaggcggcagggcacctcacgccgaagctcagcatcaagcgc
caggtggtgctcgaggccttcgccgacgtgatcacccggatctacgaggcggcgccgacg
accgaggggcactcgctggtccactga
DBGET
integrated database retrieval system
