Cyanidioschyzon merolae: CYME_CMS276C
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Entry
CYME_CMS276C CDS
T00175
Name
(RefSeq) exportin 1
KO
K14290
exportin-1
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03008
Ribosome biogenesis in eukaryotes
cme03013
Nucleocytoplasmic transport
cme03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CYME_CMS276C
03008 Ribosome biogenesis in eukaryotes
CYME_CMS276C
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CYME_CMS276C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cme03019
]
CYME_CMS276C
03009 Ribosome biogenesis [BR:
cme03009
]
CYME_CMS276C
03016 Transfer RNA biogenesis [BR:
cme03016
]
CYME_CMS276C
03036 Chromosome and associated proteins [BR:
cme03036
]
CYME_CMS276C
Messenger RNA biogenesis [BR:
cme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CYME_CMS276C
Ribosome biogenesis [BR:
cme03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
CYME_CMS276C
Pre-60S particles
CYME_CMS276C
Transfer RNA biogenesis [BR:
cme03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
CYME_CMS276C
Chromosome and associated proteins [BR:
cme03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
CYME_CMS276C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
IBN_N
CRM1_repeat
DUF3385
MIF4G
Motif
Other DBs
NCBI-GeneID:
16997168
NCBI-ProteinID:
XP_005538905
UniProt:
M1VBW1
LinkDB
All DBs
Position
19:697738..701079
Genome browser
AA seq
1113 aa
AA seq
DB search
MATSDATFGAVESDTAGSLLNFELPDQDFLLQLEAKVQQLYGARSETDRKSAQEELTALQ
MHPQAWMRVDKILDSSTTSEPSKFFALQILESLIKYRWKTLPTETRESIKLYVQNKAILL
SSSAESLVRERTFLSKLNLILVRIVAQEWPSRWRSFISDVVNASKTSPTLCENNLHILRL
LSEEVFDFSAGQMTQDKIDELKTTFNQDFSEVYDLCQYVFAQRVILQQMQPSLLVTTVQT
LEKFLSWVPLGYIFETDLLETLLELFDYSAELRNSVMRCLVEIATLSVGPEYDERFLFLY
MTLLSKLAVAVPLEVDIAAHYDQASEATQSFIMDLALFLTGFFGAHAALLEQSSDPAHRQ
ALVTGNMYVVKIARVNDVEVFKVCLEWWRSLTESLYRALFSMLDYAVGERTPLTLDADRP
NFERLEDQHARRQLYASVLYQIALVMIQRMAKPEEVLIVEDENGEIVRETTKDTDALALY
KTMRETFIFLTHIDPLDIETIMIEKLDRQLDGTEWSWQNLNTLCWAIGSISGTMSEESEK
RFLIHVIKDLLRLCEEKRGKDNKAVVAANIMYVVGQYPRFLRAHWRFLKTVVNKLFEFMH
ELHPGVQDMACDTFLKIAQKCRRQFVIVHAGEHQSFVNEMLDNLESIIGDLEPHQVHSFY
QSAATMISAETESSTRELYIRRLYDAPNRRWRSLLEEATLDQSLLRDRNRMKELVHVLRL
NVRGAQALGPLFYPQLVHIYMDLLALYRQFSQMVSNAVALGGMIATRSTDVKNMRAVKKE
ALRLLETFFELVDRDPEVLHAAAEQLVEPLSGPILGDYAQSVPDARDAEVLTLYAVIIEH
LRPYANMLTPLIPVIFRSCFNATLEMITTNFEDFPDHRIGLFQLLRAINTSCFSALFSLD
PDPAVAEQSFQLVINAIVWAFKHTERNVADTGLQTLLELLRNLDSSGFTEYFYERYYLFI
LNDILAVLTDTLHKPGFSLQAQVLMHLFTAARRGQVRLPQTDGGEATGSTTAMASETMVR
EHLQTLLENAFPNMGPVAVRQAVDGMFLFLDDERLFKQHLRDFLVRTKEFLAGDNTDLYD
EDRRSLETNAQRALAVVPGMSKPSQAADSDDED
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctcagatgcaacctttggggcggttgaatctgatacagcgggatcgcttctg
aactttgagctgccagatcaggactttttgctgcagctcgaggcaaaagtccagcagctc
tatggggcgcggtctgaaacagatcgcaagtcggcccaggaggagctgacggcgctccag
atgcatccacaggcgtggatgcgtgtcgataagattctcgattcgagcacgactagtgag
ccctccaagtttttcgcgctacaaattctcgagtctttaatcaagtatcgttggaagact
ttgccgaccgagacacgagagtccatcaagctttatgttcagaacaaggcaatactcttg
tcgtcgtcggcggaatctctggtacgtgaacgcacgttcctttcaaagctgaacctcatc
ttggtgcgaatagtggcccaggagtggccctcccgttggcgctcgtttatcagcgacgtt
gtgaacgcgagcaaaacgtcgccgacactttgcgaaaacaacttgcatattctccgattg
ctgagcgaggaggtgtttgatttctcagctgggcaaatgacgcaagacaaaatcgacgag
ctcaagacgacattcaaccaagattttagtgaggtttacgacctctgtcagtatgtattc
gcacagcgagtaatactgcagcagatgcagccatcgcttcttgtgactacggtgcagacg
ctagagaagtttttgtcgtgggttcctttgggctatatcttcgagaccgaccttttggag
acgctgcttgagctgttcgattactctgcagagctgcgcaatagtgtgatgcgttgcctc
gttgagattgcaacactctctgttggtcccgagtacgacgaaagatttctgtttctctac
atgacacttctatcaaaactcgccgttgcggtaccactggaggtcgacattgctgcgcac
tacgaccaggccagtgaagcaacccagtcttttattatggacttggcgctgttcctcaca
ggcttctttggggcgcacgcagcgctgctcgagcagtcttcggacccggcacatcgtcag
gcactcgtgacgggaaacatgtacgtcgtgaagattgctcgagtcaacgacgtggaggtt
ttcaaggtctgcctcgaatggtggcggagcctcacggagagcctatatcgggctctcttc
tccatgttagactacgccgtgggagagcggacgccactcactttggacgcggatcgaccc
aatttcgagcgactcgaagatcagcatgcacgtcgccagctctacgccagcgtactatac
cagattgccctggtcatgatccagagaatggcgaagccagaggaggtgctcattgtagaa
gacgagaacggcgagatcgtgcgggaaaccacgaaggacaccgatgcgttggcgctatac
aagacaatgcgggagacgttcatttttctaacccacattgacccgctggatattgaaacc
atcatgattgagaagctcgatcgtcaacttgacggaaccgagtggagttggcaaaatctg
aacacgctctgttgggccattggatccatctctggtaccatgagcgaagagtccgagaaa
cgcttcctcattcatgttatcaaggatctcctgcgattatgtgaggagaagcgaggaaag
gacaacaaagccgtggtcgcagcgaacatcatgtacgtcgtggggcagtacccgcgcttc
ctgcgagcacactggcgtttcctgaaaaccgtggtgaacaagcttttcgagttcatgcat
gagctgcacccaggagtccaggacatggcgtgcgacacgtttctgaaaatcgcgcagaaa
tgccgaagacagtttgtcatcgtacatgcaggtgaacatcaatcttttgtgaacgagatg
ctggacaatctggagagcattatcggcgatctggagccgcatcaggtgcactctttctat
cagtctgccgcaacgatgatcagtgcagagacggagagtagtacgcgggaactctacatc
cgccgtctctacgacgcgccgaatcgtcgctggcgatcccttttggaggaggcgacgctt
gaccagagcttgctgcgggataggaatcgcatgaaggagctcgttcacgttttgcgcctg
aacgtgcgaggcgcgcaggctttgggtcccctcttctatccccagctggtgcacatttac
atggatctgctcgcgctgtaccggcaattttcgcagatggtctccaatgcggtcgcatta
gggggcatgatcgcaacacgaagcaccgacgtcaagaatatgcgcgccgtgaagaaggag
gcactccgtctgctagagacatttttcgagctagtcgatcgtgaccccgaggttctgcac
gcggcagcggagcaactggtggagccgctctccggccccattctcggcgactatgcgcaa
tccgtaccggatgcccgtgacgcggaggtgcttacgctctacgctgtcattatcgaacat
ctgcggccgtacgcaaatatgctgacgcctctcataccagtcatattccgatcgtgtttc
aatgcgacgctagagatgattacgacgaattttgaggattttccggaccatcgaataggt
ctgtttcagttgttgcgagcaattaacacgtcttgcttttccgcgctgttctcattggat
ccggacccggcagtagcggagcagtcgttccagctggtcattaacgctatagtatgggcg
ttcaagcatacggagcggaacgttgccgacacaggactgcagacgctgctcgagctcctt
cggaatctggatagtagcggtttcaccgagtacttttacgagcgctattacttgttcatt
cttaacgatattcttgcagtgcttacggataccttgcacaaaccaggtttctcgctacag
gcacaagtgctcatgcatcttttcacggcagctcgtcggggtcaagttcgattgccgcaa
accgatggtggcgaagcgactggctccaccactgcgatggcctctgagacgatggtacgc
gagcatttgcaaacgctcctggagaacgcctttccgaatatgggccctgtggcagtgcgt
caagcggttgatggcatgttcctcttcctggacgacgagcgcctcttcaagcagcacttg
cgagattttctggtccggaccaaagagtttctcgcaggtgacaataccgatctttacgac
gaggatcgccgatcactagagacgaatgcccagagggccttagctgtggtccctggcatg
tccaagcccagccaagcagccgattcagacgacgaagactga
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