Cyanidioschyzon merolae: CYME_CMT315C
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Entry
CYME_CMT315C CDS
T00175
Name
(RefSeq) probable oligoribonuclease, mitochondrial precursor
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
cme
Cyanidioschyzon merolae
Pathway
cme03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cme00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CYME_CMT315C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cme03019
]
CYME_CMT315C
03009 Ribosome biogenesis [BR:
cme03009
]
CYME_CMT315C
Messenger RNA biogenesis [BR:
cme03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CYME_CMT315C
Ribosome biogenesis [BR:
cme03009
]
Eukaryotic type
Pre-60S particles
RNases
CYME_CMT315C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
16998030
NCBI-ProteinID:
XP_005539316
UniProt:
M1V7Q2
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Position
20:799699..800265
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AA seq
188 aa
AA seq
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MALVDPIVWIDCEMTGLDPEKDALLEVACIVTSGDLNTTVIEGPSFILQAPAAALAGMSD
KVRAMHSNSGLIDEVYQATLSAESAELKILEFLEAVGVGPQVAPLAGNSVHVDRRFLARY
MPKLDAYLHYRIIDVSTVKELCRRWYPNVFSRAPAKQGAHRALDDIRESISELVFYRENV
FRFPNDTA
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggcactcgttgatcccattgtttggattgactgcgaaatgacagggctagaccctgag
aaggacgccttgctagaagttgcctgcatagtcacgtcgggcgacctgaacacgactgtg
atagagggtccgagcttcatcctgcaagcaccggctgccgctctcgccggcatgagcgac
aaagttcgagcgatgcattcgaactcaggattaattgacgaagtatatcaggcgacactg
tcagcagaaagcgccgagttaaagattttggagttcttagaggcagtaggtgtcggaccg
caggtcgcaccgctcgccggaaactcggttcacgttgatcgccgcttcctcgcacgctac
atgccgaaactggacgcgtacctccactatcgaattatagatgtttcaacggtaaaagag
ctctgcagaaggtggtacccgaacgttttttctcgagccccagcaaagcaaggcgctcac
cgtgctctggacgatattcgagagagtatatctgaactggtgttctatcgtgagaacgtc
ttccggttcccgaatgacaccgcataa
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