Clavibacter michiganensis subsp. michiganensis: CMM_0825
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Entry
CMM_0825 CDS
T00529
Symbol
wcoG
Name
(GenBank) putative cell surface protein
KO
K20276
large repetitive protein
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CMM_0825 (wcoG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
Laminin_G_3
Laminin_G_2
Laminin_G_1
Sde0182_C
Rax2
InlK_D3
GH115_C
Motif
Other DBs
NCBI-ProteinID:
CAN00859
UniProt:
A5CP64
LinkDB
All DBs
Position
934078..939963
Genome browser
AA seq
1961 aa
AA seq
DB search
MSILSSAGRRLAAMTAAAAVILSAVVVAQPAMADSAPVDPTDPKTPVTVTADPLPTTQID
GVAWSQVVVGNTVYVAGKFQNARPAGAAAGTNLTPRSNLLAYDIRTGALITSFAPKLNAQ
ALSVTASPDGSRIYVVGDFTDIDGQGFYRAAAFSTATGKIIPAFRPIMGSQTRTVSASND
TVYLGGTFQSVNGAARKYLAAVSATNGQNTAFVADADTVVDALTLTKDTSKLIVGGRFTQ
LSGTPTYGLGAVDPATGASLPWAANQQVKNAGAESSITSLYATDDRVYGSGYTFGAGGNL
EGAFSADPNTGVVTWVEDCHGDTYSVFATSKVAYVAGHPHYCGNIGGFPQTEPWTFQHSL
AFSKTATGTATADPYGYHNWAGTPSPSLLNWFPKYVTGSFTGQGQAAWSVNGNEDYIVVG
GEFPFVNTTAQQGLVRYAMAKDAPNKVGPNGNDQLVPKSISYTKGEARVSWQATFDRDSS
RLTYKVIRDGKTATPVYQVTQDSTFWNRPSMGFIDKGLVPGSSHTYKVVVTDAAGNSTDR
NGASPVTITDQSGSDAYATSVKDDGATAYYPLDENGGTAGLDHVAFEDLRVDNAARGAAG
PIDGSTATTFSGQDGSFAVTPQAVQAPDTFSVESWVKTTSTSGGKVVGFGGSNTGTSGNY
DRMVYLDNDGRILFGVYTGATQTLSSAPGFNDGKWHQIVATMGAEGMKLFVDGKLAGQRA
DTTRGQDYTGYWRVGGDNLGGWPNQPRSYYLAGDIAQVSIYPTALTRADVVDHLVASGRT
SPIPPAPSDAYGKAVYAADPSSYWRLDDADGSTTLKDAGQNDVGANVGRNVRFGQAGALT
GPVGQAAAFSDSIAVSQQRVSNPTSYSLEMWFQTTTTRGGKLIGFGDNADPFNFSGSYDR
HVYMQDDGRLQFGTWTGQTNLASSPRAYNDGQWHHMVASQGSDGLKLYVDGDLVGQNGQT
QAQGYDGYWRIGGDNTWGSSSGTFEGRMDEVAVYPTVLAPTTVATHFSLGTTGRVPNQAP
KAAFTQTADFLTASFDATGSTDGDGTVTGYAWDFGDGVQASGATQSHTYAAAGTYPVVLT
VTDDRGTTNRTQQDVTVKAAPANVAPTAVVTATATDLTAKLDGSASTDADGTVASYAWDF
GDGSTGTGPTPTHAYAAGGTYTVALTVTDDKGLTGTASTQVTVVAPPVNREPTAVIASTT
ADLVANLDGRASSDPDGTIASWAWEFGDGTTGAGASIAHPYAKAGTYTVALTVTDDKGAT
GRTTASVTVTAPPVNQAPVAAFTSTVANLVASLDASTSSDPDGTVASYAWAFGDGTTGTG
RTTTHAYAAAGTFAVSLTVTDDKGLATTTTSQVTVQAPASNVLAQDSFGRAVATGWGTAD
LGGAWRVTGGTAIVKVQDGTGQVVSPKGETRTMTLDAVSTTSSDVSATFSLDSVPTGGGS
YTRVNSRQVGSAFYQTQVWIKATGQIQLVQSQGATTVGSYVLPGTTYQAGQQLRVRVLTT
GTSPTTVKAKVWVAGQAEPAAWQTSVTSSTAALQAAGTVGIQTYLSGSATAPVTTRIDDL
VVARDGQAPAANQAPTAAFTSTANGLTASFDGSGSTDADGTVASYAWAFGDGTTGTGRTA
THAYAAAGTYAVSLTVTDDKGLVSAKKDGTVQVSAPVVTPANQAPTAAFTSTAKDLTASF
DASTSTDADGTVASYAWAFGDGTTGTGKTATHAYAAAGTYAVSLTVTDDKGLASAKKDGT
VTVTAPVVAPPAAGILAQDTFTRTAANGWGTAETGGAWRITGNASILKVADGKAQVASPA
GETRTASLDAVSTTASDAQVSFALDKVPTGGGSYVRINSRQVGTSYYQTQVWVRSTGQVM
IVQSENGTNLKSVVVPNVTYTAGQQLRVRAQVTGTSPTTMNAKVWPVGQAEPTAWQSTTT
GTLAALQTAGTFGIQTYLSSSAAGPVAFTLDDLVVTDGTAR
NT seq
5886 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcctctcctccgcggggcgtcgcctggccgcgatgaccgcggccgccgcggtc
atcctgtccgcggtcgtcgtcgcgcagcccgcgatggcggactccgcgccggtcgacccg
accgacccgaagacgcccgtcacggtcaccgccgacccgctgcccacgacccagatcgac
ggcgtcgcctggtcgcaggtcgtcgtcggcaacacggtctacgtggccggcaagttccag
aacgcgcgccccgcgggcgccgcggccggcacgaacctcacgccccgcagcaacctgctc
gcgtacgacatccgcacgggcgcgctcatcacgtccttcgcgccgaagctcaacgcgcag
gcgctgtcggtcaccgcctcgcccgacggatcccggatctacgtggtcggcgacttcacc
gacatcgacggccagggcttctaccgcgccgcggcgttcagcaccgcgaccggcaagatc
atcccggccttccgccccatcatgggcagccagacccgcacggtgagcgcctcgaacgac
accgtgtacctcggcggcaccttccagagcgtcaacggcgccgctcggaagtacctcgcc
gcggtgtccgcgacgaacggccagaacacggccttcgtcgcggatgcggacaccgtcgtg
gacgcgctcaccctcacgaaggacacgtccaagctcatcgtcggcggccgcttcacgcag
ctcagcggcacgccgacctacgggctcggcgcggtggatcccgccacgggcgcctcgctc
ccgtgggccgcgaaccagcaggtcaagaacgccggcgcggagtcctccatcacgagcctg
tacgcgaccgacgaccgggtctacggatccggctacacgttcggcgccggcggcaacctc
gagggcgccttctcggccgacccgaacacgggcgtcgtcacctgggtcgaggactgccac
ggcgacacctactcggtcttcgcgacgagcaaggtcgcgtacgtcgcgggccacccgcac
tactgcggcaacatcggcggcttcccgcagaccgagccgtggacgttccagcacagcctc
gcgttctcgaagaccgcgacgggcacggccacggccgacccctacggctaccacaactgg
gccggcacgccctccccgtcgctgctcaactggttcccgaagtacgtcacgggatccttc
accggccagggccaggcggcctggagcgtcaacggcaacgaggactacatcgtcgtcggc
ggcgagttcccgttcgtgaacaccaccgcgcagcagggcctcgtccgctacgcgatggcc
aaggacgcccccaacaaggtcggcccgaacggcaacgaccagctcgtccccaagtcgatc
tcctacacgaagggcgaggcccgcgtctcctggcaggccaccttcgaccgcgacagctcg
cgcctcacctacaaggtgatccgcgacggcaagaccgcgacgcccgtctaccaggtcacg
caggactcgaccttctggaaccggccgtcgatgggcttcatcgacaagggcctcgtgccc
ggcagctcgcacacctacaaggtggtcgtgaccgacgcggccgggaactccaccgaccgc
aacggcgcctcgcccgtcaccatcaccgaccagtcgggcagcgacgcctacgccacgagc
gtcaaggacgacggcgcgaccgcgtactacccgctcgacgagaacggcggcaccgccggc
ctcgaccacgtcgcgttcgaggacctccgggtcgacaacgccgcgcgcggcgcagcgggc
cccatcgacggatccaccgccaccaccttctccggccaggacgggtccttcgcggtcacg
ccccaggcggtgcaggcgccggacaccttcagcgtggagtcgtgggtcaagacgacctcg
acctcgggcggcaaggtcgtcggcttcggcggcagcaacacgggcacgtcgggcaactac
gaccgcatggtctacctcgacaacgacggccggatcctcttcggcgtctacaccggcgcg
acccagacgctgagctcggcccccgggttcaacgacgggaagtggcaccagatcgtcgcc
accatgggcgcggagggcatgaagctgttcgtcgacggcaagctcgccggccagcgcgcg
gacacgacccggggccaggactacacgggctactggcgcgtcggcggcgacaacctcggc
ggctggcccaaccagcccaggagctactacctggccggcgacatcgcccaggtgtcgatc
tacccgaccgccctcacgcgcgccgacgtcgtcgaccacctggtcgcgtccggtcgcacc
tcgcccatcccgccggcgccctcggacgcctacggcaaggccgtgtacgcggccgacccg
tcgtcctactggcgcctcgacgacgccgacggctcgacgacgctcaaggacgccgggcag
aacgacgtcggcgccaacgtcggacgcaacgtgcgcttcggccaggccggcgccctcacg
ggtccggtcggccaggcggcggcgttctccgacagcatcgcggtgagccagcagcgggtc
tcgaacccgacctcctactcgctcgagatgtggttccagacgaccaccacgcgcggcggc
aagctgatcggcttcggcgacaacgcggatccgttcaacttctccggcagctacgaccgc
cacgtctacatgcaggacgacggacgcctgcagttcggcacgtggacgggccagaccaac
ctcgcgagctcgccccgcgcctacaacgacggccagtggcaccacatggtcgcgtcgcag
ggatccgacggcctgaagctgtacgtggacggcgacctcgtcggccagaacggccagacg
caggcgcagggctacgacggctactggcgcatcggcggcgacaacacgtggggctcctcc
agcggcaccttcgagggccggatggacgaggtcgcggtctacccgaccgtgctcgccccc
accacggtggcgacgcacttctcgctcgggacgaccggccgcgtgccgaaccaggccccc
aaggccgcgttcacgcagaccgccgacttcctgacggcctcgttcgacgcgaccggatcc
acggacggcgacggcacggtcacgggctacgcctgggacttcggcgacggcgtccaggcg
tccggcgcgacccagtcgcacacgtacgccgcggcgggcacctacccggtggtcctcacg
gtgacggacgaccgcggcaccacgaaccgcacgcagcaggacgtcacggtgaaggcggcc
cccgccaacgtcgcgccgaccgccgtcgtgacggccaccgcgaccgacctcacggcgaag
ctcgacggatccgcgtccacggacgccgacggcaccgtcgcctcctacgcgtgggacttc
ggcgacggcagcacgggcaccggcccgacgccgacgcacgcctacgccgcgggcggcacc
tacacggtggctctgacggtcacggacgacaagggcctcacgggcaccgcgtccacgcag
gtgacggtggtggcgcccccggtcaaccgggagcccaccgcggtcatcgcgtcgaccacc
gcggacctcgtcgcgaacctcgacggacgcgcatccagcgacccggacggcaccatcgcg
tcctgggcgtgggagttcggcgacggcacgaccggcgccggggcgtccatcgcccacccg
tacgcgaaggccggcacctacacggtcgcgctgacggtgacggacgacaagggagccacc
ggtcggacgaccgcgagcgtcacggtcaccgccccgcccgtgaaccaggcgcccgtcgcc
gcgttcacgagcaccgtggcgaacctcgtcgcctcgctcgacgcctccacgtcgagcgac
cccgacggcaccgtggcgtcctacgcctgggccttcggcgacgggaccaccggcacgggc
cgcaccacgacccacgcctacgccgcggccggcacgttcgcggtgtcgctcacggtcacg
gacgacaagggcctcgccacgacgaccacctcgcaggtgaccgtccaggcgcccgcgtcg
aacgtgctcgcgcaggactcgttcggccgcgcggtcgccacgggctggggcacggccgac
ctcggcggcgcctggcgcgtcaccggcggaacggccatcgtcaaggtgcaggacggcacg
ggacaggtcgtctcgccgaagggcgagacccgcacgatgaccctcgacgcggtctccacc
acgtcgtcggacgtcagcgcgaccttctcgctcgactccgtccccacgggcggcggctcc
tacacccgggtcaactcccggcaggtggggtcggccttctaccagacgcaggtctggatc
aaggcgaccgggcagatccagctggtgcagtcgcagggggcgacgaccgtcgggtcgtac
gtcctccccggcacgacctaccaggccggccagcagctccgcgtccgcgtcttgacgacc
ggcacctcgccgaccaccgtcaaggccaaggtgtgggtcgccggccaggccgagcccgcc
gcctggcagacgagcgtcaccagctcgaccgccgcgctgcaggccgccggcaccgtcggg
atccagacctacctctcggggtcggcgacggctcccgtcacgacgcggatcgacgacctg
gtcgtcgcccgcgacggccaggcacccgccgcgaaccaggccccgacggcggcgttcacg
tcgaccgccaatggcctgacggcctcgttcgacggatccggctcgacggacgccgacggc
acggtcgcctcgtacgcctgggcgttcggggacgggaccacgggcacgggccgcaccgcg
acccacgcctacgccgcggccggcacctacgcggtgtcgctcaccgtgacggacgacaag
ggcctcgtctcggcgaagaaggacggcacggtccaggtgagcgcgccggtcgtcacgccg
gccaaccaggccccgacggcggcgttcacgtcgaccgccaaggacctgacggcctcgttc
gacgcatccacgtcgaccgacgcggacggcaccgtcgcctcgtacgcctgggcgttcggg
gacggcacgacgggcacagggaagaccgcgacccacgcctacgccgcggccggcacctac
gcggtgtcgctcacggtgacggacgacaagggcctggcgtcggcgaagaaggacggcacc
gtcacggtgacggcgccggtcgtcgcgccgcccgccgccgggatcctcgcgcaggacacc
ttcacccgcaccgccgcgaacggctggggaacggcggagaccggcggcgcctggcgcatc
accggcaacgcgtcgatcctcaaggtggcggacgggaaggcgcaggtcgcgagccccgcc
ggcgagacccgcaccgcgagcctcgacgccgtgagcaccaccgcatcggacgcgcaggtc
tccttcgcgctcgacaaggtgcccacgggcggcggctcgtacgtgcggatcaactcgcgc
caggtcggcacgtcgtactaccagacgcaggtctgggtgcggtcgaccggccaggtcatg
atcgtgcagtccgagaacggcaccaacctgaagtcggtcgtcgtcccgaacgtcacgtac
acggccgggcagcagctgcgggtccgcgcgcaggtcacgggcacgtcgcccaccacgatg
aacgcgaaggtctggcccgtcggccaggccgagccgaccgcgtggcagtcgacgacgacc
gggaccctggcggccctgcagacagcgggcacgttcgggatccagacgtacctgtcgagc
tcggcggccgggcccgtcgcgttcacgctagacgacctcgtggtcacggacggcacggcc
cgatga
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