Clavibacter michiganensis subsp. michiganensis: CMM_2067
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Entry
CMM_2067 CDS
T00529
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi00550
Peptidoglycan biosynthesis
cmi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CMM_2067 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmi01002
]
CMM_2067 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cmi01011
]
CMM_2067 (dacB)
Enzymes [BR:
cmi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CMM_2067 (dacB)
Peptidases and inhibitors [BR:
cmi01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
CMM_2067 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
cmi01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
CMM_2067 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
CAN02130
UniProt:
A5CSQ9
LinkDB
All DBs
Position
complement(2330668..2332107)
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AA seq
479 aa
AA seq
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MSAPAAEVPGPAVSYPGDMTGSRPAPARRPPGRSRSVRRRRDAVLAAVVATAVVGAGLVT
GILPSPAGGASADPASCTVDALTGGWSTGTLHLSAAEVDGDAGRALLDVRGDVPAATAST
MKVLTAAAAVEALGPDRRIATRVVQGARADTVVLVGGGDPTLSRLPSGTDGVYPDAPHLD
DLARQVLDARRADPDLAGVPIRRLQADSGLFTGPAWLPEWPLEARRGGSMSNITALMVDG
DRDDPAEPYSRRGEKAVARAADAFAALLGDDVAADGPLVTAAPGSAVLGTVESAPVRDLV
GYMLTHSDDTLAETLARLVAIETGAGSAAADIRSGTPAALADLDLPTDGVVLVDGSGLSD
ANRVPAALLTRLMVRVAEHRGDLAIVDAGLAVAGRTGTLAEGGRFTGAADAAAGRIRGKT
GTLERMHGLTGIADAADGTEVAFTIWAEDVDPSVPAESARAEIDALATDLHRCGGALGG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggcacccgcggccgaggtgccaggcccggccgtttcctaccctggggacatgacc
ggatcccgccccgcgcccgcccgacgcccgccgggtcgctcccggtccgtccgccgtcgc
cgggacgccgtgctcgcggccgtcgtcgcgaccgcggtggtcggtgccgggctcgtcacc
gggatcctcccgtctcccgcgggcggggcctcggcggatcccgcgtcctgcacggtcgac
gcgctcacgggcggctggtccacgggcacgctccacctctcggctgcggaggtcgacggc
gacgcggggcgcgccctgctcgacgtgcgcggcgacgtgccggcggcgaccgccagcacc
atgaaggtcctcaccgcggcggcggccgtcgaggcgctcggcccggaccgccgcatcgcc
acgcgcgtcgtccagggcgcccgcgcggacacggtcgtcctcgtcggcggcggcgatccc
acgctcagccgcctgccgtccggcaccgacggcgtctaccccgacgccccgcatctcgac
gacctcgcgcggcaggtgctcgacgcgcgccgcgccgatcccgacctcgcgggcgtcccc
atccgccgcctccaggccgacagcgggctattcaccgggccggcctggctgccggagtgg
ccgctcgaggcgaggcggggcggatccatgtcgaacatcacggccctcatggtcgacggc
gaccgcgacgacccggccgagccctactcgcgccgtggcgagaaggcggtcgcgcgcgcg
gccgacgccttcgcggcgctcctcggcgacgacgtggcggccgacggcccgctcgtgacc
gctgcacccggatccgccgtgctcggcaccgtggagtccgcgcccgtccgcgacctcgtc
ggctacatgctcacccactccgacgacacgctcgcggagaccctcgcgcggctcgtcgcg
atcgagacgggcgcgggcagcgccgccgccgacatccggagcggcacgcccgccgccctc
gcggatctcgacctgccgaccgacggcgtggtcctggtcgacggctcgggcctctcggac
gcgaaccgcgtccccgccgcgctcctcacgcggctcatggtgcgtgtcgccgagcaccgc
ggcgacctcgcgatcgtcgacgcgggtctcgcggtcgcggggcgcacgggcacgctcgcg
gagggcggccgcttcacgggcgcggcggacgcggcggccggccggatccgcggcaagacg
ggcacgctcgagcggatgcacggcctcaccggcatcgcggacgcggcggacggcaccgag
gtggccttcacgatctgggcggaggacgtggatccgtccgtccccgccgagtccgcccgc
gccgagatcgacgcgctcgcgaccgacctgcaccgctgcggcggcgcgctcggcggctga
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