Callorhinchus milii (elephant shark): 103176745
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Entry
103176745 CDS
T03088
Symbol
rho
Name
(RefSeq) rhodopsin
KO
K04250
rhodopsin
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
103176745 (rho)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cmk04030
]
103176745 (rho)
G protein-coupled receptors [BR:
cmk04030
]
Rhodopsin family
Vision
Opsin
103176745 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
Rhodopsin_N
7TM_GPCR_Srw
7TM_GPCR_Srv
7TM_GPCR_Srsx
TAS2R
Cytochrom_B_N_2
Motif
Other DBs
NCBI-GeneID:
103176745
NCBI-ProteinID:
NP_001279181
UniProt:
C0SKW1
LinkDB
All DBs
AA seq
354 aa
AA seq
DB search
MNGTEGENFYIPMSNKTGVVRSPFEYPQYYLAEPWQFSILAAYMFFLIITCFPVNFLTLY
VTFVHKKLRQPLNFILLNLAVADLFMVFGGFFITVYTSLHGYFVFGVTGCNFEGFFATLG
GEIGLWSLVVLAIERYVVVCKPMSNFRFGTNHAIMGVAFTWVMALACAVPPLMGWSRYIP
EGLQCSCGVDYYTLKPEINNESFVIYMFVVHFLIPLIIIFFCYGRLVCTVKEAAAQQQES
ESTQRAEREVTRMVIIMVIFFLICWVPYASVAFFIFTNQGSEFGPIFMAVPAFFAKSSAL
YNPLIYILLNKQFRNCMITTLCCGKHPFEEDESTSAAASKTEASSVSSSQVSPA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcacggaaggagaaaacttctatattcccatgtcgaacaagacgggagtagtg
aggagcccttttgagtatcctcagtactacctggctgagccctggcaattctccatcctg
gcagcctacatgttctttctgatcatcacttgcttccccgtcaatttccttactttgtac
gtcaccttcgtgcacaagaagctcaggcagcctctcaacttcatccttctcaacctggcc
gtagccgatctcttcatggtcttcggagggttctttataacagtgtacacatcgctgcac
ggctattttgtctttggagtcaccggctgcaacttcgagggatttttcgcgacacttggt
ggtgaaatcggcctgtggtccttggtagtcctggctattgaaagatacgtcgtggtttgc
aaacccatgagcaactttagatttggcaccaaccatgcaattatgggtgtggcattcaca
tgggtgatggccttagcatgtgctgttccccctcttatgggatggtccaggtatatccct
gaaggactgcagtgttcatgtggggttgactattacactctgaaaccagagatcaacaat
gagtcctttgtcatatatatgttcgttgtccacttccttattcctctcataattattttc
ttctgctacggacgtttggtctgcaccgtcaaagaggctgcagctcagcagcaggaatcc
gagagcacccagagagctgagagggaagtcacccgcatggtcattatcatggtcatattc
ttcctgatctgctgggtgccctacgcaagtgtggcattcttcatcttcaccaaccagggc
agtgagttcggacccatcttcatggctgttccggccttcttcgccaaaagctctgctctg
tacaaccctctgatctacatcctcttgaacaaacagttccgtaactgcatgatcaccacc
ctttgctgcgggaagcatccattcgaggaggacgagtcgacttccgccgctgccagcaag
acagaggcttcctctgtctcctccagccaggtgtctcccgcataa
DBGET
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