Callorhinchus milii (elephant shark): 103179000
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Entry
103179000 CDS
T03088
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103179000 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmk04121
]
103179000 (trip12)
Enzymes [BR:
cmk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
103179000 (trip12)
Ubiquitin system [BR:
cmk04121
]
Ubiquitin ligases (E3)
HECT type E3
103179000 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
Motif
Other DBs
NCBI-GeneID:
103179000
NCBI-ProteinID:
XP_042195199
LinkDB
All DBs
Position
Unknown
AA seq
2077 aa
AA seq
DB search
MSNRPNYNTGGSLRRSQRNTAGAQPQEEAEGGRSQSEERKEAKTPASRPASKATKLQAEA
ATGQSRGRVSRRNSRSCSSSSVASVPQQEERISRSERLKTGQPVKRDSSKSSLRGLKRGP
SPDCSSSNSTCSTKRPKAVPSSESPTETQKNKVQAKTPKKRKSVQDKPAKSAPTASTSKP
QGRKQSGSSAASPLQKRKKIETTTSAVNSGPAADLISAEERSAKPTKLASKSATSAKAGC
STVTDSSSSASTSSSSSAAVSAAVPQGARLKQGKDQNKARRSRSASSPSPRRSSREKEQN
KTGGSSKFDWATRFSPKVNLPKAKLSLPGSSKSETSKPGPSGLQAKLASLRRSTKKRSES
PPAELPSLRRSTRQKTTGSCASTSRRGSGLGKRGASEARRQEKMADPDNNQDGANSSART
EDAPQGASASSSVAGAVGMSNSGESESDDSEMGRLQGRKTWVNPSLNKALLEARGLPPHL
FGPLGPRMSQLFHRTIGSGASSKAQQLLQGLQATGDESQQLQAVIEMCQLLVMGNEETLG
GFPVKSVVPALITLLQMEHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQ
CIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITP
DEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQ
LLVVTPPILSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETLRFLLCGASSGSCQEQI
DLVPRSPQELYELTSLICELMPCLPKEGIFAVDTMLKKGSAQNTDGAIWQWRDDRGLWHP
YNRIDSRIIEAAHQVGEDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANST
TGGHSEVRKDDARAQLMREDPELAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIY
FADAELLKDVLKNHAVSSHIASMLSSQDFKIVVGALQMAEILMQKLPDIFSVYFRREGVM
HQVKNLAESETLLTSPPKAGSSGAGGLSTTATITTPTAASNTVADLGSPSFQSMDDSLDL
SPQGRLSDVLKRKRLPKRVTRRTKYSPPRDDDKVDNQAKSPTATQSPKSSFLASLNPKTW
GRLSTQTNSNNAEPARTAGVSGIARVTPKDTMSNNREKIKVWIKEQAHKFVDRYFTSENV
DTSNPALNVLQRLCTATEQLSLQADGGIECLLEIRTIVSESDVSSFEIQHSGFVKQLLLY
LTSKSDKDLVSRRIRLRRFLHVFFGCPPPGEEPLGRLEPQGNGPLLALVHKMNNCLSQME
QFPVKVHDFPSGNGTGSRGSQALKFFNTHQLKCQLQRHPDSTNVKQWKGGPVKIDPLALV
QAIERYLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPY
NMTVYQAVRQFSVQADEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEEGNKDTVGGK
RGRAQTAPTKTSPRNARKHDELWHDGVCPAVGNPLEGYLISVPPDGITFEDPSLDVILLL
RVLHAISRYWYYLYNNAFCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELG
RTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQESRVAPRLDRKKRTVNR
DELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGDEV
TLSHPKGSQEGTKYIHNPRGLFPVPFGRNTKPAYVAKVKMKLRFLGKFLAKAIMDFRLLD
LPLSLSFYKWMLRQETSLCSHDLFNIDPVVAKSVCHLEDITKQKSKLEQDRSQSKECLQQ
ALESLNMNGCSVEDLGLDFTLPGHPNIELKKGGKDTSVTIHNLEEYLRLVVYWTLNEGVS
KQFDSFRDGFESVFPLHHLQYFYPEELDQLLCGSKSEAWDVKTLMECCRPDHGYNHDSRA
VKFLFEILSSFDGEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPS
VMTCVNYLKLPDYSSIDIMREKLLIAAREGQQSFHLS
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattacaatacaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagaagaagcagaaggaggaaggtcacagtcagaagagaggaag
gaggcaaaaacacctgcaagtaggccagcttccaaagctacaaaattgcaggccgaagct
gccactggacagtccaggggacgtgtatcaaggaggaactccaggagttgcagctcttca
tctgttgcttctgtgccgcagcaagaagagaggattagtaggtcagaaagactaaaaact
ggacaacctgttaaaagagacagttccaagagcagtttgagaggcttgaaacgtggtccg
agtcccgactgtagcagctccaactccacctgttctacaaaacggcccaaagcagttccg
tcctcggaaagtcccactgaaacacaaaagaataaggtgcaagcaaagaccccaaagaaa
agaaagtctgtacaggataagccagcaaaaagtgcaccgactgcatcgacgagcaagccc
cagggcaggaaacaaagcggatccagtgctgcctctcctttacagaaaaggaaaaagatt
gagacaaccacctctgctgtaaacagtggtcctgcagctgacttgatcagtgctgaagag
agatctgctaaaccaaccaagctggcttcaaaatcagcgacctcagccaaagctgggtgt
agcacagttactgattcttcctcctctgcctctacgtcctcttcatcatctgctgctgtt
tccgctgccgtacctcagggagccaggttaaaacaaggtaaagaccagaataaggctcgc
cgctcccgctcggcctcaagcccaagccctcgcaggagcagtcgggaaaaggaacagaat
aaaactggtggctcctccaagtttgattgggctactcgtttcagcccaaaagtcaacctg
ccaaaagcaaaactgtcacttccgggctcttctaaatcggagacatcaaagccagggcca
tcaggcctgcaagctaagttagccagcttaagaagatctaccaagaaacgcagtgaatca
ccaccagcagagctccccagcttgaggcggagcacacgccaaaagaccacgggctcctgt
gctagtaccagtcggcgaggctctggcctgggcaaaagaggagcatccgaggctcgccga
caggagaagatggcagatcctgataacaaccaggacggagcaaattcttctgcacgcaca
gaagatgcacctcaaggagcatcagcttctagttctgttgctggggctgtggggatgtca
aactctggagagagtgaatcggatgactctgaaatgggcagactacaaggaagaaaaacc
tgggtaaacccatcattaaacaaagccttgttggaggctcgtggccttccaccccatttg
tttggccctcttggtccgcgaatgtcccagctctttcataggacaattggaagtggagca
agttccaaggcccagcagctcctgcagggcttgcaggccactggagatgagagtcagcaa
cttcaggcagtcattgaaatgtgccagcttttggtcatgggaaatgaagaaaccttggga
ggatttccagtcaagagtgttgttccagctttgataaccttgttgcagatggaacacaac
tttgatattatgaaccatgcttgcagagctctgacttacatgatggaagctcttcctagg
tcatcagctgtggttgttgatgccattccagtgtttctggaaaagctgcaagtcattcag
tgcatagatgtggctgaacaggccttgactgctctggagatgttatcacgtagacacagt
aaagctattttgcaagctggaggattggctgactgcttgctgtatttggaattcttcagc
atcaatgctcagcggaacgcactggctatagcagcaaactgctgtcagagcatcaccccg
gatgaatttcactttgttgctgattcactgcccctcttaacccaaaggctgacccatcag
gacaagaaatctgtggaaagtacttgcttatgttttgctcgtttagtggacaacttccag
catgaagaaaacttgttacagcaggtggcatcccgggatttactgacgaacattcagcag
cttctggtggtcactcctcctatcctcagctccggcatgttcatcatggtggtccgcatg
ttctcactgatgtgctccaactgtcctactctggctgtgcagctgatgaagcaaaacatt
gcagaaacacttcgctttttactttgtggcgcttcaagtggcagctgccaagaacaaatt
gatcttgtaccacgaagtccacaagagctttatgagcttacttcccttatttgtgagctg
atgccatgtctacccaaagaaggaatttttgctgttgatactatgctaaagaagggaagt
gctcaaaatacagatggtgcaatatggcaatggcgtgatgaccggggcttgtggcatcca
tataaccgaattgatagtcggataattgaggcagcccatcaagtgggtgaggatgagata
agcttgtcaacattggggcgagtttacactattgattttaactctatgcagcagatcaat
gaggacactgggacagcacgtgctattcagagaaaaccaaatccattggccaactctact
actggtggtcattctgaagtcaggaaagacgatgcacgtgctcaactgatgagggaggac
cctgagctggcgaaatgctttataaagacattgtttggtgtgttgtacgaagtgtacagt
tcctcggctggacctgctgtcagacacaagtgccttagagcaattcttagaataatttat
tttgctgatgctgaacttctaaaggatgtgttgaaaaatcatgctgtttccagccacatt
gcttcaatgttatcaagtcaagatttcaagatagttgtcggagctctacagatggcagag
attttaatgcagaagttaccagacatattcagtgtttacttcagaagagaaggtgtgatg
catcaagtgaaaaacttagcagagtccgagactctccttaccagccctccaaaggcgggc
agtagtggggcagggggtctgagcactacagccacaattaccacacccactgctgcaagc
aatacagttgcagatctgggttcccccagcttccaaagtatggacgactctttggactta
agtccacaaggacgattaagtgatgtcttaaagaggaaaagattgccaaaacgtgtaacc
aggaggacaaaatattcacctccaagagatgatgacaaagtagacaatcaagcaaagagc
cctacagccacccagtctcccaaatcttccttcctggcgagcttaaatcctaaaacctgg
ggaagattaagcacacaaaccaacagcaacaatgcagaaccagcgcgtacggccggggtt
agtggcattgctcgggttaccccaaaggacactatgtccaacaatagagagaagataaag
gtgtggataaaggaacaggcacataaatttgtggaccgttacttcacctcggagaacgtg
gacacgagcaatcctgcactgaatgtactacagagactttgtactgccactgaacagctc
agcttgcaggcggatggtgggattgagtgccttttagaaatccgcacaatagtctcagag
tccgacgtgtcgtccttcgaaatccagcacagtggctttgtgaaacagttgctgctgtat
ttgacttcaaaaagcgacaaagaccttgtgagccggcgtatcagattgagacggtttctt
cacgtgttcttcggttgtccgcctccaggagaagaacctcttgggcgactggaaccgcaa
gggaacggacctctgttggcacttgtgcacaaaatgaacaactgtctgagccaaatggaa
cagtttccagtgaaggtgcacgactttcctagtgggaatggaaccggcagcagaggatca
caggccctgaaattcttcaacacacaccagttaaaatgtcagctgcagagacatcccgac
agcaccaatgtcaaacagtggaagggtggtcctgtgaagatcgatcccctggctttagtg
caggctattgagagatatcttgtagtcagagggtatggaagaatacgtgaagaagatgaa
gatagtgatgatgatggttcggatgatgagattgatgagtcactggctgcccaattcttg
aattcagggagcgtaaggcatagactacagttttacattggagatcacttgctgccttac
aacatgactgtttaccaagctgtcaggcagttcagtgttcaagctgatgaggaaagggag
tcgactgatgatgaaagcaatccgttaggaagggcaggaatatggactaaaactcatact
atatggtacaaacctgttcgagaggatgaagaaggaaataaggatacggttggtggaaag
cgaggccgagctcagaccgcaccgactaaaacctccccaagaaatgcaagaaagcatgat
gagttgtggcatgatggtgtgtgccctgcagttggaaatcctttagaagggtatctaatt
tcagtccctccagatggtataacatttgaagacccatccctggatgtgattctgcttttg
agagtcctgcatgctatcagtcgatactggtattacctgtataataatgcattctgcaaa
gagattattccaaccagcgaattcatcaacagcaagctgactgctaaagctaaccgccag
cttcaagatcctctggttatcatgacaggaaatatcccaacatggttgacagaactagga
aggacttgcccgtttttcttcccctttgacacacgacaaatgctgttctatgtgactgcg
tttgatcgcgatcgagccatgcaaagattgctggacactaacccagaaatcaaccagtcc
gattcccaggagagtagggttgcaccccgcctggataggaaaaagcgtactgtgaacagg
gacgagctgctgaagcaagccgaatcagttatgcaggatttaggcagctcaagagcaatg
ctggagatccagtatgaaaatgaagttgggacggggctgggtccaacattggagttctat
gcacttgtatctcaggaactgcagagagctgatctgggactctggcgtggagacgaggtc
actctgtcacatcctaaaggcagccaagaagggaccaagtacatccacaatccacgaggc
ctcttccctgtgcctttcggaaggaatacaaaaccagcatacgtggctaaagtcaaaatg
aagttgcggtttctggggaagttcttggccaaagctatcatggatttccgtttgctggac
ttgccactcagcctgtcattttacaaatggatgttacggcaagaaacttcactctgctcc
cacgacctcttcaacatcgatccagtcgttgcaaaatcagtttgtcatcttgaggatatc
acaaagcagaaaagtaaactggagcaggacaggtctcagagcaaagaatgtcttcagcag
gccctggaaagcctgaacatgaatggctgctctgtggaggacttgggactggacttcacg
ctgcctggacaccctaacattgaactaaaaaaagggggcaaggacacaagtgtcaccatt
cacaatctggaggagtatctgaggttggtagtgtactggaccttaaatgaaggcgtttcc
aagcagtttgactctttccgagatggctttgagtctgttttcccactccatcacttgcag
tatttttaccctgaagagttggatcagttactctgtggcagcaagtcggaggcttgggat
gtgaagactttaatggagtgttgcagaccagatcatggatataatcatgacagtcgtgct
gttaaatttctgtttgaaatactcagcagttttgatggtgaacaacagagactgtttctt
caatttgttaccggtagcccccgactccccgttggagggtttcggagcctgaaccctcca
ctgaccatcgttcgcaagacctttgaatccacagaaaatcctgatgattttttgccctca
gtaatgacctgtgttaattatctcaagttgccagattactccagtatcgatataatgcgt
gaaaaacttttaatagctgctagagaagggcagcagtcgttccatctctcctga
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integrated database retrieval system
